DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddr and ddr2l

DIOPT Version :10

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:XP_073808071.1 Gene:ddr2l / 565333 ZFINID:ZDB-GENE-041210-162 Length:873 Species:Danio rerio


Alignment Length:1004 Identity:333/1004 - (33%)
Similarity:471/1004 - (46%) Gaps:213/1004 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 CKQALGMESGAIADFQITASSA-HDMGNVGPQHARLKIDNNGGAWCPKHMVSRGLTEYLQVDLLG 169
            |:..||||.|.|.:..|||||. :|  :.|||:|||..:...||||....:.....:|||:||..
Zfish    23 CRYPLGMEDGRIKNDDITASSQWYD--STGPQYARLNREEGEGAWCAAGQLQPSDVQYLQIDLRQ 85

  Fly   170 VHLVSAIRTQGRFGKGQGQEYTEAYVIEYWRPGLKKWIRWRSLQGKEVLPGNINTYSEVENVLQP 234
            :..::.:.||||:.:..|.|:...|.:||.|.| .:||.||:..|.|::.||:|||..|...|.|
Zfish    86 LIFLTVVATQGRYARNSGIEFARKYRLEYSRDG-HRWISWRNRFGNEIIMGNVNTYDTVVRDLHP 149

  Fly   235 SVFASKVRLYPYSQYDRTVCLRAEIVGCAWEEGIVSYSIPKG---MQRGMDI-DLSDKTYDGYEE 295
            .:....:||.|.:....|||:|.|:.||||::|:::||.|:|   |..|..| .|:|.||||..|
Zfish   150 PIITRFLRLIPVTDAVHTVCMRVELFGCAWQDGLMAYSSPEGQIMMAPGFPITSLNDSTYDGPLE 214

  Fly   296 GDHYVNGLGQLVDGQRGKDNF-RADINGLGKGYEWIGWRNDTLLGRPVEIIFEFETVRNLSAVII 359
            ......|||||.||..|.|:| .:....|..||:::|||||.|....||:.|:|:..||.:::.:
Zfish   215 RRKLSGGLGQLADGVVGLDDFVESRQYRLWPGYDYVGWRNDGLGPGYVEMEFQFDRQRNFTSMKV 279

  Fly   360 HTNNMFSKDVQVFVHAKVFFSIGGRH----FSGEPVQFSYMPDLVLDHARDVTIKLHHRLGRYVQ 420
            |:|||||..|::|......|.:   |    :..|||:|..:.|.....||.|||.|.||....::
Zfish   280 HSNNMFSMGVKIFSSVSCVFKL---HLISEWESEPVEFHTVIDDRNPSARYVTIPLKHRSATALR 341

  Fly   421 LHLYFAARWMMISEITFISAPVVGNFTDELANGEKQSVTSEYPLQRDEV-----GRAISSGGERS 480
            ...|||..|||.|||:|                  ||||...|.::..|     ..|.|...|.:
Zfish   342 CRFYFADTWMMFSEISF------------------QSVTIVLPTKKPPVLTPPSYEANSEIPETT 388

  Fly   481 QHTTQVISPKPIDHQEPETSFVGVIITVLGTIIMLLVAFILLIVARNKHVRSRENGLDAFQHNFS 545
            |.|....:|....  .||.....::|..|.|||:|||..|.||                      
Zfish   389 QKTEDWTTPTKTG--SPEEGNTSILIGCLVTIILLLVVIIFLI---------------------- 429

  Fly   546 PDTLNGNGVLKVVTTMDDNESSIDKNSLYHEPFNANMYTSAASACPMNDLQRQHVSPDYTDVPDI 610
                                                                            :
Zfish   430 ----------------------------------------------------------------L 430

  Fly   611 VCQDYAVPHMQQLLPNAPPCGSGCGTGTGTGPGRGSSPEFVVATGKVTASARNSLNAATLPLPSP 675
            .||     ::.::|..||               |....|.|        :.|.|.::.|:.|.:|
Zfish   431 WCQ-----YVCKVLEKAP---------------RRILEEEV--------AVRLSSSSDTIILQTP 467

  Fly   676 PVP------PPLEKYYAATPVSSKPMPV---APPGSQS------SGSLSSSTTAATTPTSGVVGV 725
            |||      ||.|:.:...|....|..:   .|..|||      ||..:.......||...... 
Zfish   468 PVPPRVSIDPPYERIFLLDPQYQDPAALRNKLPELSQSAETSACSGGYAEPDVTLCTPHQSFQS- 531

  Fly   726 GKPHHYNLDM-------SANFADI------NEERANCQVQEFPRQSLVIVEKLGSGVFGELHLCE 777
            ..||:...|:       .:|...:      :..|.:..|.|||||.|:..||||.|.|||:||||
Zfish   532 SAPHYAETDIISLQGVTGSNMYSVPALTVDSLTRKDISVAEFPRQRLLFREKLGEGQFGEVHLCE 596

  Fly   778 TNVL---------------NATLVAVATLRPGANDHLRKEFRSKAKQLAQLSDPNVARLVGACLR 827
            ...|               ...||||..||..|..:.|.:|..:.|.:::|::||:.:|:..|:.
Zfish   597 AEGLAEFLGEGAPLPEQDGRPVLVAVKQLRADATSNARNDFLKEIKIMSRLNNPNIIQLLCVCVS 661

  Fly   828 DEPICIVQDYSHCLGDLNQFLQEHVAETSGLMAKK--SLSFGCLVYIATQIASGMKHLEQMNFVH 890
            .:|:|:|.:|.. .||||.||.:...|::...|..  |:|...|::::.||:||||:|..:||||
Zfish   662 SDPLCMVTEYME-NGDLNMFLSQREIESTLTHANNIPSVSIADLLHMSVQISSGMKYLASLNFVH 725

  Fly   891 RDLATRSCIIGPELCVKVCSIGTVINRSAYASDYCQLEGFTGRQSQPMPIRWMAWESVLLGKFTT 955
            ||||||:|::...|.:|:...|  ::|:.|:|||.:::|     ...:|||||||||:|||||||
Zfish   726 RDLATRNCLLDRHLTIKISDFG--MSRNLYSSDYYRIQG-----RAVLPIRWMAWESILLGKFTT 783

  Fly   956 KSDVWSFAVALWEILTFAREQPYEHLSDKSVIENIGLIYRDYKMHELLPMPPNCPREIYDLMCEC 1020
            .||||:|.|.||||.|..:||||..|||:.||||.|..:|:......|..||.||..::.||..|
Zfish   784 ASDVWAFGVTLWEIFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIFLSAPPLCPSSLFKLMMRC 848

  Fly  1021 WQRDESSRPSFREIHLYLQRKNLGFKPQT 1049
            |.||.:.||||.::|..|:.    |.|.:
Zfish   849 WSRDITDRPSFNKLHQALRT----FAPHS 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 109..261 CDD:238014 60/152 (39%)
PTKc_DDR 753..1040 CDD:270644 133/303 (44%)
ddr2lXP_073808071.1 None

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