DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddr and ddr2b

DIOPT Version :10

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:XP_017206819.2 Gene:ddr2b / 559428 ZFINID:ZDB-GENE-060503-361 Length:838 Species:Danio rerio


Alignment Length:993 Identity:321/993 - (32%)
Similarity:465/993 - (46%) Gaps:196/993 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 FGMGTAVGTPETPAAVGSNGLLAEMPIGTCKQALGMESGAIADFQITASSAHDMGNVGPQHARLK 141
            ||   ||.:...||              .|:..|||..|.|.|..|:|||... .:...::.||.
Zfish    14 FG---AVNSQVNPA--------------VCRYPLGMNGGQIQDEDISASSQWS-ESTAARYGRLD 60

  Fly   142 IDNNGGAWCPKHMV-SRGLTEYLQVDLLGVHLVSAIRTQGRFGKGQGQEYTEAYVIEYWRPGLKK 205
            .|:..|||||..|. :..|.|:||:||..:|.|:.:.||||...|.|.|:.:.|.|:|.|.| .:
Zfish    61 FDDGDGAWCPDVMAEAHSLKEFLQIDLRTLHFVTLVGTQGRHADGVGNEFAQRYRIKYSRDG-TR 124

  Fly   206 WIRWRSLQGKEVLPGNINTYSEVENVLQPSVFASKVRLYPYSQYDRTVCLRAEIVGCAWEEGIVS 270
            |:.||..||::::.||.|.|..|...|:|.:.|..||..|.:.....||:|.|:.||.|.:|:||
Zfish   125 WVSWRDRQGRQIIEGNSNAYDIVLKDLEPPIIARFVRFMPVTDPSMIVCMRVELYGCEWLDGLVS 189

  Fly   271 YSIPKGMQ---RGMDIDLSDKTYDGYEEGDHYVNGLGQLVDGQRGKDNF-RADINGLGKGYEWIG 331
            ||.|.|.|   ||..|.|:|..||| ........|||||.||..|.|:| ::.:.|:..||:::|
Zfish   190 YSAPAGQQMTFRGQQIYLNDTVYDG-AVSSSMAEGLGQLTDGSWGLDDFTKSQVYGVWPGYDYVG 253

  Fly   332 WRNDTLLGRPVEIIFEFETVRNLSAVIIHTNNMFSKDVQVFVHAKVFFSIGGRHFSGEPVQFSYM 396
            |.|.:|.|..||:.|||:.|||.:::.:|.|||::..|::|..|...|. ....:...||.|...
Zfish   254 WTNASLPGGSVEMTFEFDRVRNFTSMKVHCNNMYAWGVKMFRQAVCSFR-SDADWEPNPVFFKPK 317

  Fly   397 PDLVLDHARDVTIKLHHRLGRYVQLHLYFAARWMMISEITFISAPVVGNFTDELANGEKQSVTSE 461
            .|.:...||.:|:.|.:|:...::....|:..|||.|||.|.|...|.|             ||.
Zfish   318 ADSISPSARFITVALGNRMASAIRCRFAFSDIWMMFSEIAFQSDTAVYN-------------TSL 369

  Fly   462 YPLQRDEVGRAISSGGERSQHTTQVISPKPID---HQEPETSFVGVIITVLGTIIMLLVAFILLI 523
            .|.:|::.                     |:|   |:..::| ..::|..|..||.:|:|.|::|
Zfish   370 VPRKRNQA---------------------PVDDPTHKIDDSS-TRILIGCLVAIIAILLAIIIII 412

  Fly   524 VARNKHVRSRENGLDAFQHNFSPDTLNGNGVLKVVTTMDDNE----SSIDKNSLYHEPFNANMYT 584
            :.|....:..|                     |....|.|:|    .|:.:.:..|.       :
Zfish   413 LWRQVWQKMIE---------------------KASRRMLDDELAVRLSVQREAFVHR-------S 449

  Fly   585 SAASACPMNDLQRQHVSPDYTDVPDIVCQDYAVPHMQQLLPNAPPCGSGCGTGTGTGPGRGSSPE 649
            |:.|:...:....:.:.|        :..||..|  .|||...                    ||
Zfish   450 SSLSSDVESTSTYERIFP--------LGSDYQEP--SQLLRKL--------------------PE 484

  Fly   650 FVVATGKVTASARNSLNAATLPLPSPPVPPPLEKYYAATPVSSKPMPVAPPGSQSSGSLSSSTTA 714
            |............:.        |||........:||...:         ||:.     |...|.
Zfish   485 FQAMENLAMIDGASE--------PSPAQGTDEAPHYAEADI---------PGAH-----SYRVTV 527

  Fly   715 ATTPTS-GVVGVGKPHHYNLDMSANFADINEERANCQVQEFPRQSLVIVEKLGSGVFGELHLCET 778
            ...|.| |..|.                         ::||||..|...||||.|.|||:||||.
Zfish   528 VNMPLSPGRDGA-------------------------LEEFPRDRLTFKEKLGEGQFGEVHLCEA 567

  Fly   779 N-------------VLNATLVAVATLRPGANDHLRKEFRSKAKQLAQLSDPNVARLVGACLRDEP 830
            .             .::..||||.|||..|:.:.|.:|..:.:.:::|.|||:.||:..|:..:|
Zfish   568 EGMQEFMKDHCDDICVDPMLVAVKTLREDADKNARNDFMKEIRIISRLRDPNIIRLLAVCVESDP 632

  Fly   831 ICIVQDYSHCLGDLNQFLQEHVAETSGLMA-KKSLSFGCLVYIATQIASGMKHLEQMNFVHRDLA 894
            :|::.:|.. .|||||||..|..:..|:.| ..|:|:|.|:.:|:||:||||:|..:||||||||
Zfish   633 LCMITEYME-NGDLNQFLSRHQLQEDGVQADSTSISYGTLINMASQISSGMKYLSSLNFVHRDLA 696

  Fly   895 TRSCIIGPELCVKVCSIGTVINRSAYASDYCQLEGFTGRQSQPMPIRWMAWESVLLGKFTTKSDV 959
            ||:|::|....:|:...|  ::|:.|..||.:::|     ...:|||||:|||:||||||..|||
Zfish   697 TRNCLVGMNNIIKIADFG--MSRNLYRGDYYRIQG-----RAVLPIRWMSWESILLGKFTMASDV 754

  Fly   960 WSFAVALWEILTFAREQPYEHLSDKSVIENIGLIYRDYKMHELLPMPPNCPREIYDLMCECWQRD 1024
            |:|.|.||||||..:||||...:|:.||||.|..:||......|..|..||..:|.||..||:|:
Zfish   755 WAFGVTLWEILTLCKEQPYAQFTDEQVIENTGEFFRDQNKQVYLLRPACCPESLYSLMLNCWRRN 819

  Fly  1025 ESSRPSFREIHLYLQRKN 1042
            ...||:|.|||..|..::
Zfish   820 AKERPTFLEIHSTLTEQH 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 109..261 CDD:238014 59/152 (39%)
PTKc_DDR 753..1040 CDD:270644 133/300 (44%)
ddr2bXP_017206819.2 FA58C 28..180 CDD:238014 59/153 (39%)
PTKc_DDR 542..835 CDD:270644 133/300 (44%)

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