DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddr and Alk

DIOPT Version :9

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:NP_001261027.1 Gene:Alk / 53425 FlyBaseID:FBgn0040505 Length:1701 Species:Drosophila melanogaster


Alignment Length:1150 Identity:246/1150 - (21%)
Similarity:386/1150 - (33%) Gaps:364/1150 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SPTIGVPALVESQGGEGHESRRPATNYLKSY---CRIKRHGVNNSK--TLCWLTLTLILLANRFG 78
            |||       ...|.:|..:.:...|....|   ..:.:| :|||:  ::.......|:::..|.
  Fly   531 SPT-------HDTGPDGDHTMQHLQNNTSGYYMLVNMNQH-MNNSEKNSIIGFASNAIMVSKTFN 587

  Fly    79 MGTAV-GTPETPAAVGSNGLLAEMPIGTCKQALGMESGAIADFQITASSAHDMGNVGPQHARLKI 142
            ...:| |.|::|                      ..:..:..|.|     |..|. .|....|.:
  Fly   588 PPPSVHGNPDSP----------------------YRNSCVVRFFI-----HQFGK-NPGSINLSV 624

  Fly   143 -----------------DNNGGAWCPKHMVSRGLTE--YLQVDL-LGVHLVSAIRTQG------R 181
                             .|.|..|.....|...:|.  |||.:. :|:.:.|.:....      .
  Fly   625 VEMKEKENITTTLWWSTKNQGSDWMRAEYVLPNITSKYYLQFEARMGMRIYSDVAVDDFSLSPEC 689

  Fly   182 FGKGQGQEYTEAYVIEYW--RPGLKKWIRWRSLQGKEVLPGNINTYSEVE--NVLQPSVFASKVR 242
            ||....:::...|  .||  |..||.                 .||.:.|  |.|:.:...::..
  Fly   690 FGLNIPEDHLGGY--NYWDVRQNLKS-----------------PTYKDFEYTNYLELTTCDTRGM 735

  Fly   243 LYP--------YSQYDRTVCLRAEIVGCAWEEGIVSYSIPKGMQRGMDIDLSDKTYDGYEEGDHY 299
            :.|        |.:.::|..||...|       :...|..||||:          :....|| ||
  Fly   736 IGPSQAQCEAAYREQNKTHVLREVHV-------VEDQSSYKGMQK----------WKVPHEG-HY 782

  Fly   300 VNGLGQLVDGQRGKDNFRADINGLGKGYEWIGWRNDTLLGRPVEIIFEFETVRNLSAVIIHTNNM 364
            .    .:..|..|         |||.|  .:|                  :.|...||.|     
  Fly   783 T----IIAKGASG---------GLGSG--GVG------------------SSRGSVAVAI----- 809

  Fly   365 FSKDVQVFVHAKVFFSIGGRHFSGEPVQFSYMPDLV-----LDHARDVTIKLHHRLGRYVQLHLY 424
                :::..:.:::|.:|.:   ||......|..|.     .||..|        |.:|     .
  Fly   810 ----LELHKNEELYFLVGQQ---GENACIKSMGVLKEAGCGTDHDLD--------LAQY-----S 854

  Fly   425 FAARWMMISEI--------------TFI-------SAPV----------VGNFTDE-LANGEKQS 457
            |.::..|:..|              .|:       :.|:          :|.:.|| ..:|:|..
  Fly   855 FRSKQDMVKNIYIENGAGGGGGGSYVFLLNQAKNEAVPLLVAGGGGGLGIGQYIDEDFQHGQKAK 919

  Fly   458 VTSEYPLQRDEVGR----------AISSGGERSQHTTQVISPKPIDHQEPETSFVGVIITVLGTI 512
                 |||..|.|:          |...||.|::. .|.:||                       
  Fly   920 -----PLQAPESGQINGEPLNKKTAGPGGGWRAKE-DQALSP----------------------- 955

  Fly   513 IMLLVAFILLIVARNKH---VRSRENGLDAFQHNFSP--------DTLNGNGVL---KVVTTMDD 563
               .....||...|..|   |...:||....:|....        :|..|.|..   .|..|   
  Fly   956 ---TYGAALLQGGRGGHSCYVELADNGTSVHRHGQGGFGGGGGGCNTGGGGGGYAGGDVYLT--- 1014

  Fly   564 NESSIDKNSLYHEPFNANMYTSAASACPMNDLQRQHVSPDYTDVPDIVCQDYAVPHMQQLLPNAP 628
             ||:.:..|.|..|                       |....::.:|.....:.|....::|...
  Fly  1015 -ESNGEGGSSYISP-----------------------SRSLREISEIHAGASSGPGAIIIIPAIE 1055

  Fly   629 PCGSG----------------CGTGTGTGPGRGSSPEFVVATGKVTASARNS---LNAATLPLPS 674
            .||..                |..|........::.|.....||.:.....|   ::.|.|.:..
  Fly  1056 GCGCDYRCVALDEFRSKVRCICPDGWSLKRDNHTACEIREEAGKSSFQYLVSILMISLAVLFICI 1120

  Fly   675 PPVPPPLEKYYAATPVSSKPMPVAPPG----SQSSGSLSSSTTAATTPTSGVVGVGKPHHYNLDM 735
            ..:...|...|.....|.|...:....    ::...::..|......|..|..|:...|      
  Fly  1121 AALIFMLYNRYQRKKQSKKRHKMLVEQDLQLTRLRNNIDDSNLNNFNPNYGCDGILNGH------ 1179

  Fly   736 SANFADINEERANCQVQEFPRQSLVIVEKLGSGVFGELHLCETNVLNATL----VAVATLRPGAN 796
                .|:|      .:.:..|.||.:|..||.|.|||:::......:...    |||.|||....
  Fly  1180 ----IDVN------SLPQVARDSLQLVNALGKGAFGEVYMALYRHRDGDAVEMGVAVKTLREDPK 1234

  Fly   797 DHLRKEFRSKAKQLAQLSDPNVARLVGACLRDEPICIVQDYSHCLGDLNQFLQE--HVAETSGLM 859
            ....::|..:|..:|:.:.||:..|:|.|...:|..||.:.. ..|||.:||:|  :..|...|:
  Fly  1235 REKEEDFLKEAAIMAKFNHPNMVHLIGVCFDRQPYYIVLELL-AGGDLQKFLRENRNTPERPSLL 1298

  Fly   860 AKKSLSFGCLVYIATQIASGMKHLEQMNFVHRDLATRSCII---GPELCVKVCSIGTVINRSAYA 921
            ..|.|.| |    |..:|.|.:::|...|:|||:|.|:|::   ||...||:...|  ::|..|.
  Fly  1299 TMKDLLF-C----ALDVAKGCRYMESKRFIHRDIAARNCLLSSKGPGRVVKIADFG--MSRDIYR 1356

  Fly   922 SDYCQLEGFTGRQSQPMPIRWMAWESVLLGKFTTKSDVWSFAVALWEILTFAREQPYEHLSDKSV 986
            |||.:..|     ...:||:||..|:.|.|.||:|:|||||.:.|||:.:..| .||....:..|
  Fly  1357 SDYYRKGG-----KAMLPIKWMPPEAFLDGIFTSKTDVWSFGILLWEVFSLGR-SPYPGQHNTQV 1415

  Fly   987 IENIGLIYRDYKMHELLPMPPNCPREIYDLMCECWQRDESSRPSF 1031
            :|   |:.|..:    |..|..||..||.:|.:||......||:|
  Fly  1416 ME---LVVRGGR----LGSPTECPVSIYKVMADCWNPTPEDRPTF 1453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 106..262 CDD:214572 35/193 (18%)
FA58C 109..261 CDD:238014 34/189 (18%)
PTKc_DDR 753..1040 CDD:270644 97/287 (34%)
TyrKc 759..1038 CDD:197581 95/281 (34%)
AlkNP_001261027.1 MAM 288..450 CDD:279023
MAM 288..447 CDD:99706
MAM 505..691 CDD:279023 33/195 (17%)
MAM 505..689 CDD:99706 33/193 (17%)
PTKc_ALK_LTK 1186..1462 CDD:270632 97/288 (34%)
TyrKc 1193..1460 CDD:197581 95/281 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455265
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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