DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddr and NTRK3

DIOPT Version :10

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:XP_016877743.1 Gene:NTRK3 / 4916 HGNCID:8033 Length:850 Species:Homo sapiens


Alignment Length:487 Identity:149/487 - (30%)
Similarity:214/487 - (43%) Gaps:128/487 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   655 GKVTASARNSLNAAT-------LPLPSP-------------PVPP-------------------- 679
            |..|..|:|.|..|.       |..|.|             |.||                    
Human   374 GNYTLIAKNPLGTANQTINGHFLKEPFPESTDNFILFDEVSPTPPITVTHKPEEDTFGVSIAVGL 438

  Fly   680 -------------PLEKYYAATPVSSK-PMPVAPPGSQSSGSLSSSTTAATTPTS-------GVV 723
                         .:.||...:....| |:.|......|:..|.......|||:|       .|:
Human   439 AAFACVLLVVLFVMINKYGRRSKFGMKGPVAVISGEEDSASPLHHINHGITTPSSLDAGPDTVVI 503

  Fly   724 G------VGKPHHYNLDMSANFADINEERANCQ-----VQEFPRQSLVIVEKLGSGVFGELHLCE 777
            |      :..|.::            .:..||.     ||...|:.:|:..:||.|.||::.|.|
Human   504 GMTRIPVIENPQYF------------RQGHNCHKPDTYVQHIKRRDIVLKRELGEGAFGKVFLAE 556

  Fly   778 TNVLNAT----LVAVATLRPGANDHLRKEFRSKAKQLAQLSDPNVARLVGACLRDEPICIVQDY- 837
            ...|:.|    ||||..|: ......||:|:.:|:.|..|...::.:..|.|...:|:.:|.:| 
Human   557 CYNLSPTKDKMLVAVKALK-DPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYM 620

  Fly   838 SHCLGDLNQFLQEHVAETSGLM------AKKSLSFGCLVYIATQIASGMKHLEQMNFVHRDLATR 896
            .|  ||||:||:.|..:...|:      ||..|....:::||:||||||.:|...:|||||||||
Human   621 KH--GDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATR 683

  Fly   897 SCIIGPELCVKVCSIGTVINRSAYASDY-----CQLEGFT---GRQ------------SQPMPIR 941
            :|::|..|.||:...|  ::|..|::||     ||...|:   .||            ...:|||
Human   684 NCLVGANLLVKIGDFG--MSRDVYSTDYYREGPCQKGPFSVVWQRQRLAATAASTVGGHTMLPIR 746

  Fly   942 WMAWESVLLGKFTTKSDVWSFAVALWEILTFAREQPYEHLSDKSVIENIGLIYRDYKMHELLPMP 1006
            ||..||::..||||:||||||.|.||||.|:.: ||:..||:..|||.|       ....:|..|
Human   747 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGK-QPWFQLSNTEVIECI-------TQGRVLERP 803

  Fly  1007 PNCPREIYDLMCECWQRDESSRPSFREIHLYL 1038
            ..||:|:||:|..||||:...|.:.:||:..|
Human   804 RVCPKEVYDVMLGCWQREPQQRLNIKEIYKIL 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 109..261 CDD:238014
PTKc_DDR 753..1040 CDD:270644 119/317 (38%)
NTRK3XP_016877743.1 LRR_8 103..160 CDD:404697
leucine-rich repeat 105..128 CDD:275378
leucine-rich repeat 129..151 CDD:275378
leucine-rich repeat 152..164 CDD:275378
LRRCT_2 163..208 CDD:465313
ig 214..299 CDD:395002
Ig strand B 227..231 CDD:409568
Ig strand C 240..244 CDD:409568
Ig strand E 266..270 CDD:409568
Ig strand F 281..286 CDD:409568
Ig strand G 294..297 CDD:409568
IgI_TrKABC_d5 304..396 CDD:409360 6/21 (29%)
Ig strand A 305..311 CDD:409360
Ig strand A' 313..316 CDD:409360
Ig strand B 319..327 CDD:409360
Ig strand C 330..337 CDD:409360
Ig strand C' 340..343 CDD:409360
Ig strand D 348..354 CDD:409360
Ig strand E 358..366 CDD:409360
Ig strand F 374..382 CDD:409360 3/7 (43%)
Ig strand G 385..393 CDD:409360 1/7 (14%)
PTKc_TrkC 532..843 CDD:270676 119/317 (38%)
Blue background indicates that the domain is not in the aligned region.

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