DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddr and Cad96Ca

DIOPT Version :10

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:843 Identity:188/843 - (22%)
Similarity:303/843 - (35%) Gaps:257/843 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 LGQLVDGQRGKDNFRAD-INGLGKGYEWIGWRNDTLLGRPVEIIFEFE---------------TV 351
            :||::|..|.:|....| |.|:...:...|..||.  ..|.:|.|:.:               ..
  Fly    72 VGQIIDRVRAEDPDGDDLIFGIEPRFSLPGGENDA--SPPEKIPFQIDRETGVVTLNESLAGRAG 134

  Fly   352 RNLSAVIIHTNNMFSKDVQVFVHAKVFFSIGGRHFSGEPVQFSYMPDLVLDHARDVTIKLHHRLG 416
            :|....|..|:..::...:||::.     :|.|..|.     .|.|...:.   :|...:...|.
  Fly   135 QNFLIYITVTDGSYTAKNEVFINI-----LGERENSS-----GYRPQTSIS---NVVHNISQFLP 186

  Fly   417 RYVQLHLYFAAR----------WM-MISEITFISAPVVGN-----------FTDELANGEKQ--- 456
            |:.||....:.|          |. .:.:......|..||           ...|.:..|:|   
  Fly   187 RFDQLPGVQSIRNGLPNSRPGGWYPPVPQNNIFGPPPFGNNYPPPPPNIPGVRGEQSGEEEQPDE 251

  Fly   457 SVTSEYPLQRDEVGRAISSGGERSQ---------HTTQVISPKPIDHQEP--------------- 497
            .||...|::       |||...:|:         ::|:|.|..|.:...|               
  Fly   252 EVTPTTPVR-------ISSTTPKSRTKLTPITANNSTRVESAIPAETTTPSGGHHNNSSSPITIF 309

  Fly   498 --ETSFVGVIITVLG--TIIMLLVAFI----LLIVARN-KHVRSRENGLDAFQHNFSPDTLNGNG 553
              ::..:.:::||.|  ..|.:|:|::    |..::|. |..:.:|            :....:.
  Fly   310 SLKSGTIPIVVTVGGFFVAIAVLLAYLCRRRLCAISRTLKKTKEKE------------ELAKKSN 362

  Fly   554 VLKVVTTMDDNESSIDKNSLYHEPFN-----ANMYTSAASACPMNDLQRQHVSPDYTDVPDIVCQ 613
            ..::.:|:.|:    .:||:..:.:.     ||.|                              
  Fly   363 QSQLSSTLTDD----SRNSMVMQQWQGPVAFANRY------------------------------ 393

  Fly   614 DYAVPHMQQLLPNAPPCGSGCGTGTGTGPGRGSSPEFVVATGKVTASARNSLNAATLPLPSPPVP 678
               ||..:                         ..:..:||.:::....|.      .:.||.||
  Fly   394 ---VPWER-------------------------DQQMGIATSQLSTGVTNG------GVSSPGVP 424

  Fly   679 PPLEKYYAATPVSSKPMPVAPPGSQ-SSGSLSSSTTAATTPTSGVVGVGKPHHYNLDMSANFADI 742
            .|               ....|||. ..|.|:....::..|.:...|                  
  Fly   425 SP---------------GTGEPGSNLGPGCLTGGAGSSGAPENAFAG------------------ 456

  Fly   743 NEERANCQVQEFPRQSLVIVEKLGSGVFGELHLCETNVLNA----TLVAVATLRPGANDHLRKEF 803
               .|||...||||..|.....||.|.||::..||...:|.    |.|||.||:..|.:..||:.
  Fly   457 ---EANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGITTVAVKTLKESATEVDRKDL 518

  Fly   804 RSKAKQLAQLSDP--NVARLVGACLRDEPICIVQDYSHCLGDLNQFL-----QEHVAETSGLMAK 861
            .|:.:.:..| :|  ||..|:|.|...:|..::.:|.: .|.|..:|     :.|...|.|   |
  Fly   519 LSELEVMKSL-EPHINVVHLLGCCTDKDPTFVILEYVN-RGKLQTYLRSSRAERHYGNTHG---K 578

  Fly   862 KSLSFGC-LVYIATQIASGMKHLEQMNFVHRDLATRSCIIGPELCVKVCSIGTVINRSAYASDYC 925
            .::...| |.....|:|.||.:|.....:|||||.|:.:|..:...||...|       :|.|..
  Fly   579 SNVLTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDHTCKVADFG-------FARDVI 636

  Fly   926 QLEGFTGRQSQPMPIRWMAWESVLLGKFTTKSDVWSFAVALWEILTFAREQPYEHLSDKSVIENI 990
            ..:.:..:....:||||||.||:....|:.|||:|||.:.:|||:|.. ..||..:|...|:..:
  Fly   637 TSKIYERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLG-STPYPGISAADVMRKV 700

  Fly   991 GLIYRDYKMHELLPMPPNCPREIYDLMCECWQRDESSRPSFREIHLYLQRKNLGFKPQTHTHM 1053
            ...||       |..|.:|.||:|::|..||..|...||.|.||...|.:       ..||.|
  Fly   701 RDGYR-------LEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDK-------LLHTEM 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 109..261 CDD:238014
PTKc_DDR 753..1040 CDD:270644 99/298 (33%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 21/98 (21%)
PTKc 474..742 CDD:270623 93/287 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.