DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddr and ephb4a

DIOPT Version :10

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:NP_571489.1 Gene:ephb4a / 30688 ZFINID:ZDB-GENE-990415-62 Length:987 Species:Danio rerio


Alignment Length:298 Identity:97/298 - (32%)
Similarity:158/298 - (53%) Gaps:32/298 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   745 ERANCQVQEFPRQ---SLVIVEK-LGSGVFGELHLCETNV----LNATLVAVATLRPGANDHLRK 801
            |..|..|:||.::   |.|.:|: :|:|.|||  :|...:    .....||:.||:.|..|..|:
Zfish   603 EDPNEAVREFAKEIDVSCVKIEEVIGAGEFGE--VCRGRLRIPGKKENYVAIKTLKGGYTDKQRR 665

  Fly   802 EFRSKAKQLAQLSDPNVARLVGACLRDEPICIVQDYSHCLGDLNQFLQEHVAETSGLMAKKSLSF 866
            :|.::|..:.|...||:..|.|......|:.|:.::.. .|.|:.||:.:..:.:.:.       
Zfish   666 DFLAEASIMGQFQHPNIIHLEGIITASCPVMILTEFME-NGALDSFLRLNDGQFTPIQ------- 722

  Fly   867 GCLVYIATQIASGMKHLEQMNFVHRDLATRSCIIGPELCVKVCSIGTVINRSAYASDYCQLEGFT 931
              ||.:...||||||:|.:|::||||||.|:.::...|..||...|.    |.:..:......:|
Zfish   723 --LVGMLRGIASGMKYLSEMSYVHRDLAARNILVNSNLVCKVSDFGL----SRFLQENSSDPTYT 781

  Fly   932 GRQSQPMPIRWMAWESVLLGKFTTKSDVWSFAVALWEILTFAREQPYEHLSDKSVIENIGLIYRD 996
            ......:||||.|.|::...|||..|||||:.:.:||:::|. |:||..:|::.|   |..|.:|
Zfish   782 SSLGGKIPIRWTAPEAIAFRKFTCASDVWSYGIVMWEVMSFG-ERPYWDMSNQDV---INAIEQD 842

  Fly   997 YKMHELLPMPPNCPREIYDLMCECWQRDESSRPSFREI 1034
            |:    ||.||:|...::.||.:|||::.::||.|..|
Zfish   843 YR----LPPPPDCSTYLHQLMLDCWQKERTARPRFANI 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 109..261 CDD:238014
PTKc_DDR 753..1040 CDD:270644 94/290 (32%)
ephb4aNP_571489.1 EphR_LBD 26..199 CDD:470656
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 319..340
fn3 339..418 CDD:394996
FN3 440..533 CDD:238020
EphA2_TM 547..618 CDD:464211 5/14 (36%)
PTKc_EphR_B 616..884 CDD:173638 92/285 (32%)
SAM_EPH-B4 914..980 CDD:188953
Blue background indicates that the domain is not in the aligned region.

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