DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddr and Ntrk2

DIOPT Version :10

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:XP_008769647.1 Gene:Ntrk2 / 25054 RGDID:3213 Length:837 Species:Rattus norvegicus


Alignment Length:730 Identity:189/730 - (25%)
Similarity:303/730 - (41%) Gaps:197/730 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 PDLVLDHARDVTIK----------LHHRLGRYVQLHLYFAARWMMISEITFISAPVVGNFTDELA 451
            |:|.::..:.|||.          |:..:|..|..|:...:.......||.||:           
  Rat   204 PNLTVEEGKSVTISCSVGGDPLPTLYWDVGNLVSKHMNETSHTQGSLRITNISS----------- 257

  Fly   452 NGEKQSVTSEYPLQRDEVGRAISSGGER-------SQHTTQVISPKPIDHQEPETSFVGVI-ITV 508
                           |:.|:.||...|.       |.:.|...:|.....:.|.:.....| .||
  Rat   258 ---------------DDSGKQISCVAENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTV 307

  Fly   509 LGTIIMLLVAFILLIVARNKHVRSRENGLDAFQHNFSPDTLNGNGVLKVVTTMDDNESSIDKNSL 573
            .|                        |...|.|..::...||.:   |.:.|    :..:..::.
  Rat   308 RG------------------------NPKPALQWFYNGAILNES---KYICT----KIHVTNHTE 341

  Fly   574 YH------EPFNANM--YTSAASACPMNDL---QRQ-------------HVSPDYTDVPDIVCQD 614
            ||      .|.:.|.  ||..|.    |:.   :||             ..:|:|   |:::.:|
  Rat   342 YHGCLQLDNPTHMNNGDYTLMAK----NEYGKDERQISAHFMGRPGVDYETNPNY---PEVLYED 399

  Fly   615 YAVPHMQQLLPNAPPCGSGCGTGTGTGPGRGSSPEFVVATGKVTASARNSLNAATLPLPSPPVPP 679
            :..|                   |..|.....|.| :.:|.....:.|..|:...:.:.:..|..
  Rat   400 WTTP-------------------TDIGDTTNKSNE-IPSTDVADQTNREHLSVYAVVVIASVVGF 444

  Fly   680 PL-------------------EKYYAATPVSSK----PMPVAPPGSQSSGSLSSSTTAATTPTSG 721
            .|                   ..::....|.|:    |..|......|:..|...:..:.||:|.
  Rat   445 CLLVMLLLLKLARHSKFGMKDVSWFGIGKVKSRQGVGPASVISNDDDSASPLHHISNGSNTPSSS 509

  Fly   722 -------VVGVGK------PHHYNLDMSANFADINEERANCQVQEFPRQSLVIVEKLGSGVFGEL 773
                   ::|:.|      |.::.:..|       :.:.:..||...|.::|:..:||.|.||::
  Rat   510 EGGPDAVIIGMTKIPVIENPQYFGITNS-------QLKPDTFVQHIKRHNIVLKRELGEGAFGKV 567

  Fly   774 HLCETNVL----NATLVAVATLRPGANDHLRKEFRSKAKQLAQLSDPNVARLVGACLRDEPICIV 834
            .|.|...|    :..||||.||: .|:|:.||:|..:|:.|..|...::.:..|.|:..:|:.:|
  Rat   568 FLAECYNLCPEQDKILVAVKTLK-DASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 631

  Fly   835 QDY-SHCLGDLNQFLQEHVAETSGLMAK----KSLSFGCLVYIATQIASGMKHLEQMNFVHRDLA 894
            .:| .|  ||||:||:.| ...:.|||:    ..|:...:::||.|||:||.:|...:|||||||
  Rat   632 FEYMKH--GDLNKFLRAH-GPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLA 693

  Fly   895 TRSCIIGPELCVKVCSIGTVINRSAYASDYCQLEGFTGRQSQPMPIRWMAWESVLLGKFTTKSDV 959
            ||:|::|..|.||:...|  ::|..|::||.::.|.|     .:|||||..||::..||||:|||
  Rat   694 TRNCLVGENLLVKIGDFG--MSRDVYSTDYYRVGGHT-----MLPIRWMPPESIMYRKFTTESDV 751

  Fly   960 WSFAVALWEILTFAREQPYEHLSDKSVIENIGLIYRDYKMHELLPMPPNCPREIYDLMCECWQRD 1024
            ||..|.||||.|:.: ||:..||:..|||.|       ....:|..|..||:|:|:||..||||:
  Rat   752 WSLGVVLWEIFTYGK-QPWYQLSNNEVIECI-------TQGRVLQRPRTCPQEVYELMLGCWQRE 808

  Fly  1025 ESSRPSFREIHLYLQ 1039
            ..:|.:.:.||..||
  Rat   809 PHTRKNIKNIHTLLQ 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 109..261 CDD:238014
PTKc_DDR 753..1040 CDD:270644 117/296 (40%)
Ntrk2XP_008769647.1 LRR_8 92..150 CDD:404697
LRRCT_2 151..195 CDD:465313
Ig 205..283 CDD:472250 18/103 (17%)
Ig strand B 214..218 CDD:409390 3/3 (100%)
Ig strand C 227..230 CDD:409390 1/2 (50%)
Ig strand E 245..252 CDD:409390 0/6 (0%)
Ig strand F 262..268 CDD:409390 2/5 (40%)
Ig strand G 276..279 CDD:409390 0/2 (0%)
IgI_TrkB_d5 286..379 CDD:409441 23/127 (18%)
Ig strand A 286..294 CDD:409441 1/7 (14%)
Ig strand A' 295..298 CDD:409441 1/2 (50%)
Ig strand B 301..309 CDD:409441 3/7 (43%)
Ig strand C 312..319 CDD:409441 2/6 (33%)
Ig strand C' 322..325 CDD:409441 0/2 (0%)
Ig strand D 330..335 CDD:409441 1/8 (13%)
Ig strand E 341..349 CDD:409441 2/7 (29%)
Ig strand F 357..365 CDD:409441 3/11 (27%)
Ig strand G 368..376 CDD:409441 2/7 (29%)
PTKc_TrkB 547..834 CDD:270675 117/296 (40%)
Blue background indicates that the domain is not in the aligned region.

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