DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddr and EPHB1

DIOPT Version :10

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:NP_004432.1 Gene:EPHB1 / 2047 HGNCID:3392 Length:984 Species:Homo sapiens


Alignment Length:794 Identity:186/794 - (23%)
Similarity:297/794 - (37%) Gaps:242/794 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   447 TDELANGEKQSVTSEYP------LQRDEVGRAISSGGERSQHTTQVISPKPIDHQEPETSF--VG 503
            ||.:...:|.:..||.|      :..||....:..||...:..|:|.|..|:.......:|  .|
Human   117 TDSVIATKKSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEVRSFGPLTRNGFYLAFQDYG 181

  Fly   504 VIITVLG---------TIIMLLVAF---------ILLIVARNKHVRSRENGLDAFQHNFSPDTL- 549
            ..:::|.         :|:.....|         ..|::||...:.:.|. :|.      |..| 
Human   182 ACMSLLSVRVFFKKCPSIVQNFAVFPETMTGAESTSLVIARGTCIPNAEE-VDV------PIKLY 239

  Fly   550 -NGNGVLKV----VTTMD--DNESSIDKNSLYHEPFNANMYTSAASACPMNDLQRQHVSPDYT-- 605
             ||:|...|    .|...  :.|:|:...:.....|.|:......|.||.|.......||..|  
Human   240 CNGDGEWMVPIGRCTCKPGYEPENSVACKACPAGTFKASQEAEGCSHCPSNSRSPAEASPICTCR 304

  Fly   606 --------DVPDIVCQDYAVP-----------HMQQLLPNAPPCGSG-------------CGTGT 638
                    |.|::.|.  :||           ....:|...||..:|             |....
Human   305 TGYYRADFDPPEVACT--SVPSGPRNVISIVNETSIILEWHPPRETGGRDDVTYNIICKKCRADR 367

  Fly   639 GTGPGRGSSPEFV-----VATGKVTASAR----------NSLNAATLPLPSPP------------ 676
            .:......:.|||     :...:|:.|:.          .::|..:...|.||            
Human   368 RSCSRCDDNVEFVPRQLGLTECRVSISSLWAHTPYTFDIQAINGVSSKSPFPPQHVSVNITTNQA 432

  Fly   677 VPP--PLEKYYAATPVS---SKPMPVAPPG----------------SQSSGSLSSSTTA------ 714
            .|.  |:....:||..|   |.|.|..|.|                ..||.:.|.:.||      
Human   433 APSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLR 497

  Fly   715 ---------------------------------------------ATTPTSGVVGV--------- 725
                                                         |.:..:|||.|         
Human   498 PGMVYVVQVRARTVAGYGKFSGKMCFQTLTDDDYKSELREQLPLIAGSAAAGVVFVVSLVAISIV 562

  Fly   726 --------------GKPHHYNLDMSA----------NFADINEERANCQVQEFPRQ---SLVIVE 763
                          .|..||:....:          .:.|.||     .|:||.::   |.|.:|
Human   563 CSRKRAYSKEAVYSDKLQHYSTGRGSPGMKIYIDPFTYEDPNE-----AVREFAKEIDVSFVKIE 622

  Fly   764 K-LGSGVFGELHLCETNV--LNATLVAVATLRPGANDHLRKEFRSKAKQLAQLSDPNVARLVGAC 825
            : :|:|.|||::.....:  .....||:.||:.|.::..|::|.|:|..:.|...||:.||.|..
Human   623 EVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVV 687

  Fly   826 LRDEPICIVQDYSHCLGDLNQFLQEHVAETSGLMAKKSLSFGCLVYIATQIASGMKHLEQMNFVH 890
            .:..|:.|:.::.. .|.|:.||:::..:.:.:.         ||.:...||:|||:|.:||:||
Human   688 TKSRPVMIITEFME-NGALDSFLRQNDGQFTVIQ---------LVGMLRGIAAGMKYLAEMNYVH 742

  Fly   891 RDLATRSCIIGPELCVKVCSIGTVINRSAYASDYCQLEGFTGRQSQPMPIRWMAWESVLLGKFTT 955
            ||||.|:.::...|..||...|.    |.|..|......:|......:|:||.|.|::...|||:
Human   743 RDLAARNILVNSNLVCKVSDFGL----SRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTS 803

  Fly   956 KSDVWSFAVALWEILTFAREQPYEHLSDKSVIENIGLIYRDYKMHELLPMPPNCPREIYDLMCEC 1020
            .|||||:.:.:||:::|. |:||..:|::.|   |..|.:||:    ||.|.:||..::.||.:|
Human   804 ASDVWSYGIVMWEVMSFG-ERPYWDMSNQDV---INAIEQDYR----LPPPMDCPAALHQLMLDC 860

  Fly  1021 WQRDESSRPSFREI 1034
            ||:|.:|||.|.||
Human   861 WQKDRNSRPRFAEI 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 109..261 CDD:238014
PTKc_DDR 753..1040 CDD:270644 98/288 (34%)
EPHB1NP_004432.1 EphR_LBD_B1 20..195 CDD:198444 17/77 (22%)
fn3 326..412 CDD:394996 11/85 (13%)
fn3 435..518 CDD:394996 14/82 (17%)
EphA2_TM 542..616 CDD:464211 14/78 (18%)
PTKc_EphR_B 614..882 CDD:173638 96/283 (34%)
SAM_EPH-B1 908..975 CDD:188950
PDZ-binding. /evidence=ECO:0000255 982..984
Blue background indicates that the domain is not in the aligned region.

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