DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddr and Ephb4

DIOPT Version :10

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:NP_001153043.1 Gene:Ephb4 / 13846 MGIID:104757 Length:996 Species:Mus musculus


Alignment Length:541 Identity:139/541 - (25%)
Similarity:220/541 - (40%) Gaps:162/541 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   629 PCGS--GCGTGTGTGPG-----------RGSSPEFVVATGKVTASARNSLNA-ATLPLP------ 673
            |.||  .||......||           ||..|: |..|.:|  :|.|.::. ||.|.|      
Mouse   366 PGGSCLPCGGDMTFDPGPRDLVEPWVAIRGLRPD-VTYTFEV--AALNGVSTLATGPPPFEPVNV 427

  Fly   674 -----------SPPVPPPLE--KYYAATPVS---SKPMPVAPPGSQSSGSLSSSTTAATTPTS-- 720
                       ||.|||.:.  :...::|.|   |..:|.||.|:.....:......|..|:|  
Mouse   428 TTDREGRIGFLSPAVPPAVSDIRVTRSSPSSLILSWAIPRAPSGAVLDYEVKYHEKGAEGPSSVR 492

  Fly   721 ------------------------------GVVGVGKPHH--YNLDMSANFAD------------ 741
                                          |....|:.||  ..||.|.::.:            
Mouse   493 FLKTSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDESESWREQLALIAGTAVVG 557

  Fly   742 ---------------------------------------------INEERANCQVQEFPRQ---S 758
                                                         ...|..|..|:||.::   |
Mouse   558 VVLVLVVVIIAVLCLRKQSNGREVEYSDKHGQYLIGHGTKVYIDPFTYEDPNEAVREFAKEIDVS 622

  Fly   759 LVIVEK-LGSGVFGELHLCETNV----LNATLVAVATLRPGANDHLRKEFRSKAKQLAQLSDPNV 818
            .|.:|: :|:|.|||  :|...:    ...:.||:.||:.|..:..|:||.|:|..:.|...||:
Mouse   623 YVKIEEVIGAGEFGE--VCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 685

  Fly   819 ARLVGACLRDEPICIVQDYSHCLGDLNQFLQEHVAETSGLMAKKSLSFGCLVYIATQIASGMKHL 883
            .||.|......|:.|:.::.. .|.|:.||:.:..:.:.:.         ||.:...|||||::|
Mouse   686 IRLEGVVTNSVPVMILTEFME-NGALDSFLRLNDGQFTVIQ---------LVGMLRGIASGMRYL 740

  Fly   884 EQMNFVHRDLATRSCIIGPELCVKVCSIGTVINRSAYASDYCQLEGFTGRQSQPMPIRWMAWESV 948
            .:|::||||||.|:.::...|..||...|.    |.:..:......:|......:||||.|.|::
Mouse   741 AEMSYVHRDLAARNILVNSNLVCKVSDFGL----SRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 801

  Fly   949 LLGKFTTKSDVWSFAVALWEILTFAREQPYEHLSDKSVIENIGLIYRDYKMHELLPMPPNCPREI 1013
            ...|||:.||.||:.:.:||:::|. |:||..:|::.|   |..|.:||:    ||.||:||..:
Mouse   802 AFRKFTSASDAWSYGIVMWEVMSFG-ERPYWDMSNQDV---INAIEQDYR----LPPPPDCPTSL 858

  Fly  1014 YDLMCECWQRDESSRPSFREI 1034
            :.||.:|||:|.::||.|.::
Mouse   859 HQLMLDCWQKDRNARPRFPQV 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 109..261 CDD:238014
PTKc_DDR 753..1040 CDD:270644 95/290 (33%)
Ephb4NP_001153043.1 EphR_LBD_B4 17..196 CDD:198442
FN3 324..429 CDD:238020 19/65 (29%)
fn3 444..527 CDD:394996 12/82 (15%)
EphA2_TM <573..621 CDD:464211 5/47 (11%)
PTKc_EphR_B 619..887 CDD:173638 93/285 (33%)
SAM_EPH-B4 916..982 CDD:188953
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 974..996
PDZ-binding. /evidence=ECO:0000255 994..996
Blue background indicates that the domain is not in the aligned region.

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