DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddr and ddr1

DIOPT Version :9

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:XP_002939505.1 Gene:ddr1 / 100488573 XenbaseID:XB-GENE-485346 Length:946 Species:Xenopus tropicalis


Alignment Length:1040 Identity:341/1040 - (32%)
Similarity:499/1040 - (47%) Gaps:181/1040 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LCWLTLTLILLANRFGMGTAVGTPETPAAVGSNGLLAEMPIGTCKQALGMESGAIADFQITASSA 127
            |.|..|.|.|         .:..|:           |.....:|:.||||:...|.|..||||||
 Frog    10 LFWFNLLLAL---------CIAEPD-----------AHFDPSSCRYALGMQDRTIPDEDITASSA 54

  Fly   128 HDMGNVGPQHARLKIDNNGGAWCPKHMVSRGLTEYLQVDLLGVHLVSAIRTQGRFGKGQGQEYTE 192
            .. .:...:|:||:.::..|||||...|.....|:|||||..:|.::.:.||||.|.|.|:|:..
 Frog    55 WS-DSTEAKHSRLESNDGDGAWCPLGPVFPNYEEFLQVDLRNLHFLTLVGTQGRDGGGLGKEFAR 118

  Fly   193 AYVIEYWRPGLKKWIRWRSLQGKEVLPGNINTYSEVENVLQPSVFASKVRLYPYSQYDRTVCLRA 257
            .|.:.|.|.|. ||.:||...|.||:.||.||:..|...|.|.:.|..||.||.:....:||||.
 Frog   119 HYQLRYSRDGF-KWSQWRDRWGNEVIEGNENTHDSVLKDLGPPIIARYVRFYPMADRVMSVCLRV 182

  Fly   258 EIVGCAWEEGIVSYSIPKG---MQRGMDIDLSDKTYDGYEEGDHYVNGLGQLVDGQRGKDNF-RA 318
            |:.||.|::|:.||:.|.|   ....|.|:|:|.||||:..|.....|||||.||..|.|:| :.
 Frog   183 ELYGCIWQDGLRSYTSPPGNVMSLPSMLINLNDSTYDGFTVGGLQYGGLGQLTDGVIGADDFLQH 247

  Fly   319 DINGLGKGYEWIGWRNDTLLGRPVEIIFEFETVRNLSAVIIHTNNMFSKDVQVFVHAKVFFSIGG 383
            ...|:..||:::||.........:|:.|||:.:|:...:.:|.|||.|..:|:|.....:|. ..
 Frog   248 KEQGVWPGYDYVGWMTSNFPKGYLEMEFEFDALRSFIYMRVHCNNMGSGGIQIFRRVDCYFK-RS 311

  Fly   384 RH--FSGEPVQFSYMPDLVLDHARDVTIKLHHRLGRYVQLHLYFAARWMMISEITFISAPVVGNF 446
            .|  :..:||..|...|:....||.|||.|..|..|.::.|.||:::|:::|||:|:|..:....
 Frog   312 LHTPWDPQPVTLSLALDVRDPSARSVTIALQGRAARILRCHYYFSSQWLLLSEISFLSDILDATD 376

  Fly   447 TDE-------LANGEKQSVTSEYPLQRDEVGRAISSGGERSQHTTQVISP-------KPIDHQEP 497
            .:|       :.......|||   :.:|...|..:|.|..:.....|:..       :||  .:.
 Frog   377 PEEPSPLPPPMQTIPPPEVTS---IPQDTTKRETTSTGTTASLNGHVLEAGIDIRMNQPI--AKD 436

  Fly   498 ETSFVGVIITVLGTIIMLLVAFILLIVARNKHVRSRENGLDAFQHNFSPDTLNGNGVLKVVTTMD 562
            ::....::|..|..||:||:..|:||:.|.:..|.    |...|...|...|..:..|...|.:.
 Frog   437 DSGDTSILIGCLVVIILLLLVVIILILWRQRWKRL----LGKAQRRPSDSDLTAHLSLPTDTVVI 497

  Fly   563 DN--------------ESSIDKNSLYHEPFN---ANMYT----SAASACPMNDLQRQHVSPDYTD 606
            :|              |..|.....|.||.:   |.:.|    |..:|..:|       :|.|  
 Frog   498 NNTHNAPGPPRHANRYERIITSEGEYQEPSHNPRAKITTLSLSSEGAALLLN-------NPAY-- 553

  Fly   607 VPDIVCQDYAVPHMQQLLPNAPPCGSGCGTGTGTGPGRGSSPEFVVATGKVTASARNSLNAATLP 671
              :::...|:.|                                :...|.:.|...||.......
 Frog   554 --ELLLTTYSRP--------------------------------ITEHGGLQAKPINSQEGGYRE 584

  Fly   672 LPSPPVP---PPLEKYYAATPVSSKPMPVAPPGSQSSGSLSSSTTAATTPTSGVVGVGKPHHYNL 733
            |.:|.:|   ||...:||...:.:           ..|....:|.|....|:..:.         
 Frog   585 LETPKLPACCPPSVPHYAEADIVT-----------LQGVTGGNTYAVPALTADSLA--------- 629

  Fly   734 DMSANFADINEERANCQVQEFPRQSLVIVEKLGSGVFGELHLCETNVLN---------------- 782
                     :::...|   :|||..|:..||||.|.|||:||||  |:|                
 Frog   630 ---------SKDLPLC---KFPRGHLLFKEKLGEGQFGEVHLCE--VVNPHELPTLQFPFNMRKG 680

  Fly   783 -ATLVAVATLRPGANDHLRKEFRSKAKQLAQLSDPNVARLVGACLRDEPICIVQDYSHCLGDLNQ 846
             :.||||..||..||.:.|.:|..:.|.|::||||::.||:||||.::|:|::.:|.. .|||||
 Frog   681 RSLLVAVKLLRADANKNARSDFLKELKILSRLSDPHIIRLLGACLDEDPLCMITEYME-NGDLNQ 744

  Fly   847 FLQEH---VAETSGLMAKKSLSFGCLVYIATQIASGMKHLEQMNFVHRDLATRSCIIGPELCVKV 908
            ||..|   ..|.||.....::|:..|:::|.||.||||:|..:||||||||:|:|::|....:|:
 Frog   745 FLSSHHLDEGEESGAQCLPAISYPSLLHVAVQICSGMKYLSSLNFVHRDLASRNCLVGENFTIKI 809

  Fly   909 CSIGTVINRSAYASDYCQLEGFTGRQSQPMPIRWMAWESVLLGKFTTKSDVWSFAVALWEILTFA 973
            ...|  ::|:.||.||.:::|     ...:||||||||.:|:|||||.||||:|.|.|||||...
 Frog   810 ADFG--MSRNLYAGDYYRIQG-----RAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 867

  Fly   974 REQPYEHLSDKSVIENIGLIYRDYKMHELLPMPPNCPREIYDLMCECWQRDESSRPSFREIHLYL 1038
            :||||..|||:.||||.|.|:||.|....|..||.||:.:|:||.:||.||...||||::||..|
 Frog   868 KEQPYGELSDEDVIENAGEIFRDSKKQIFLFRPPPCPQPLYELMLQCWSRDCRERPSFQDIHALL 932

  Fly  1039  1038
             Frog   933  932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 106..262 CDD:214572 65/155 (42%)
FA58C 109..261 CDD:238014 64/151 (42%)
PTKc_DDR 753..1040 CDD:270644 143/306 (47%)
TyrKc 759..1038 CDD:197581 139/298 (47%)
ddr1XP_002939505.1 FA58C 35..186 CDD:238014 64/152 (42%)
PTKc_DDR1 637..934 CDD:133227 143/306 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 270 1.000 Domainoid score I1800
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 525 1.000 Inparanoid score I1217
OMA 1 1.010 - - QHG45751
OrthoDB 1 1.010 - - D122892at33208
OrthoFinder 1 1.000 - - FOG0001292
OrthoInspector 1 1.000 - - mtm9464
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X998
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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