DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddr and ephb1

DIOPT Version :10

Sequence 1:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster
Sequence 2:XP_017207747.1 Gene:ephb1 / 100333537 ZFINID:ZDB-GENE-070912-219 Length:1011 Species:Danio rerio


Alignment Length:360 Identity:108/360 - (30%)
Similarity:179/360 - (49%) Gaps:49/360 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   681 LEKYYAATPVSSKPMPVAPPGSQSSGSLSSSTTAATTPTSGVVGVGKPHHYNLDMSANFADINEE 745
            |:.|.....::.:|            .||:..|....||.    .|.|     .|.........|
Zfish   583 LQHYSTGRELTLRP------------DLSNCHTPMGCPTL----PGSP-----GMKIYIDPFTYE 626

  Fly   746 RANCQVQEFPRQ----SLVIVEKLGSGVFGELHLCETNV--LNATLVAVATLRPGANDHLRKEFR 804
            ..|..|:||.::    ::.|.|.:|:|.|||::.....:  .....||:.||:.|.::..|::|.
Zfish   627 DPNEAVREFAKEIDVSTVKIEEVIGAGEFGEVYKGRLKLPGKRELYVAIKTLKAGYSEKQRRDFL 691

  Fly   805 SKAKQLAQLSDPNVARLVGACLRDEPICIVQDYSHCLGDLNQFLQEHVAETSGLMAKKSLSFGCL 869
            |:|..:.|...||:.||.|...:..|:.||.::.. .|.|:.||:::..:.:.:.         |
Zfish   692 SEASIMGQFDHPNIIRLEGVVTKSRPVMIVTEFME-NGALDSFLRQNDGQFTVIQ---------L 746

  Fly   870 VYIATQIASGMKHLEQMNFVHRDLATRSCIIGPELCVKVCSIGTVINRSAYASDYCQLEGFTGRQ 934
            |.:...||:|||:|.:||:||||||.|:.::...|..||...|.    |.|..:......:|...
Zfish   747 VGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGL----SRYLQEDTSDPTYTSSL 807

  Fly   935 SQPMPIRWMAWESVLLGKFTTKSDVWSFAVALWEILTFAREQPYEHLSDKSVIENIGLIYRDYKM 999
            ...:|:||.:.|::...|||:.|||||:.:.:||:::|. |:||..:|::.|   |..|.:||: 
Zfish   808 GGKIPVRWTSPEAIAYRKFTSASDVWSYGIVMWEVMSFG-ERPYWDMSNQDV---INAIEQDYR- 867

  Fly  1000 HELLPMPPNCPREIYDLMCECWQRDESSRPSFREI 1034
               ||.|.:||..::.||.:|||:|.::||.|.:|
Zfish   868 ---LPPPMDCPTALHQLMLDCWQKDRNARPRFTDI 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdrNP_001014474.3 FA58C 109..261 CDD:238014
PTKc_DDR 753..1040 CDD:270644 94/288 (33%)
ephb1XP_017207747.1 EphR_LBD_B 24..199 CDD:198440
fn3 330..421 CDD:394996
fn3 437..522 CDD:394996
EphA2_TM 546..641 CDD:464211 16/78 (21%)
PTKc_EphR_B 639..907 CDD:173638 92/283 (33%)
SAM_EPH-B1 933..1000 CDD:188950
Blue background indicates that the domain is not in the aligned region.

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