DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr3 and negr1

DIOPT Version :9

Sequence 1:NP_001014459.2 Gene:dpr3 / 3346208 FlyBaseID:FBgn0053516 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_009300786.1 Gene:negr1 / 445374 ZFINID:ZDB-GENE-040822-27 Length:360 Species:Danio rerio


Alignment Length:334 Identity:72/334 - (21%)
Similarity:121/334 - (36%) Gaps:99/334 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 NITGRTGHTEAIIKC-RVDSLHDKSVSWIRKRDLHILTVGTATYTSDKRFQVTES-KDSREWTLH 307
            ::..|.|.| |:::| .:|.:  ...:|:.:..  |:..|...::.|.|..:..: .|..|::|.
Zfish    46 SVVSRQGDT-ALLRCYLLDGI--SKGAWLNRSS--IIYAGNDKWSGDPRVSIVSNVGDKHEYSLQ 105

  Fly   308 VKAPLAKDSGIYECQVNTE----PKMSMAFQLNIIEISPDAKAVISGPPDLHFKAGSAIILNCLV 368
            ::.....|.|:|.|.:.:|    ||:   .|| |:::.|....:.|   |:....||.:.|.|..
Zfish   106 IQKVDVTDEGVYTCSIQSERNLHPKL---IQL-IV
KVPPKIYDISS---DITVNEGSNVSLICAA 163

  Fly   369 Q---QPSV--KDIGPI--YWYRGEHM-ITPFDADDGQPEIPAGRGEHPQGIPEDTSPNDIMSEVD 425
            .   :|.:  :.|.|.  .:..||:: ||....|..        |::..|...|.:..|..: |.
Zfish   164 SGKPEPKISWRHISPSARKYESGEYLNITGISRDQA--------GDYECGAENDIASPDTKT-VR 219

  Fly   426 LQMEFATRI---------------------AMESQLGDTLKSRLRISNAQ--------------- 454
            :.:.|...|                     |:.|.:.:..|...||:..|               
Zfish   220 VTVNFPPAIHEMKSHGVRPGQVALLRCEAAAVPSPVFEWYKGEKRINMGQGIVINNLSSRSVLTV 284

  Fly   455 ---TTDT-GNYTC-------------------QPTTASSASVLVHVINDENPAAMQKSGACPCAL 496
               |.|. |||||                   :|||.|:.|...     .|||....:|.....|
Zfish   285 KNMTQDRYGNYTCVAVNRLGTANASVPLNPIIEPTTTSAVSSPA-----SNPAMYGSTGGAEVLL 344

  Fly   497 GPLQLLLHL 505
            ....|:|.|
Zfish   345 ACWYLILAL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr3NP_001014459.2 Ig 243..330 CDD:299845 21/90 (23%)
IG_like 243..329 CDD:214653 20/89 (22%)
Ig 350..464 CDD:299845 33/180 (18%)
IG_like <441..477 CDD:214653 16/73 (22%)
negr1XP_009300786.1 Ig 42..121 CDD:299845 18/79 (23%)
IG_like 44..136 CDD:214653 23/98 (23%)
I-set 140..222 CDD:254352 20/93 (22%)
IGc2 153..208 CDD:197706 14/62 (23%)
IG_like 236..312 CDD:214653 13/75 (17%)
IGc2 238..304 CDD:197706 13/65 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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