DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr3 and NEGR1

DIOPT Version :10

Sequence 1:NP_001014459.2 Gene:dpr3 / 3346208 FlyBaseID:FBgn0053516 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_776169.2 Gene:NEGR1 / 257194 HGNCID:17302 Length:354 Species:Homo sapiens


Alignment Length:308 Identity:64/308 - (20%)
Similarity:114/308 - (37%) Gaps:89/308 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 FDFGMPRNITGRTGHTEAIIKCRVDSLHDKSVSWIRKRDLHILTVGTATYTSDKRFQVTESKDSR 302
            |.:....|:..|.|.| |:::|.::....|. :|:.:..  |:..|...::.|.|..:: :.:.|
Human    40 FPWAAVDNMMVRKGDT-AVLRCYLEDGASKG-AWLNRSS--IIFAGGDKWSVDPRVSIS-TLNKR 99

  Fly   303 EWTLHVKAPLAKDSGIYECQVNTE--PKMSMAFQLNIIEISPDAKAVISGPPDLHFKAGSAIILN 365
            :::|.::.....|.|.|.|.|.|:  |: :|...|. :::.|....:.:   |:....|:.:.|.
Human   100 DYSLQIQNVDVTDDGPYTCSVQTQHTPR-TMQVHLT-VQVPPKIYDISN---DMTVNEGTNVTLT 159

  Fly   366 CLV---QQPSVKDIGPIYWYRGEHMITPFDADDGQPEIPAGRGEHPQGIPEDTSPNDI----MSE 423
            ||.   .:||:.      |........||  ::||.....|......|..|.::.||:    :.:
Human   160 CLATGKPEPSIS------WRHISPSAKPF--ENGQYLDIYGITRDQAGEYECSAENDVSFPDVRK 216

  Fly   424 VDLQMEFATRI--------------------------AMESQLGD---------------TLKSR 447
            |.:.:.||..|                          |.|...|:               :.:|.
Human   217 VKVVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFSTRSI 281

  Fly   448 LRISNAQTTDTGNYTC----------------QPTTA-----SSASVL 474
            |.::|......|||||                .|:||     .||.||
Human   282 LTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVL 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr3NP_001014459.2 IG_like 243..329 CDD:214653 21/87 (24%)
Ig strand B 255..259 CDD:409353 1/3 (33%)
Ig strand C 269..272 CDD:409353 0/2 (0%)
Ig strand E 304..308 CDD:409353 1/3 (33%)
Ig strand F 318..323 CDD:409353 2/4 (50%)
IG_like <441..477 CDD:214653 16/70 (23%)
NEGR1NP_776169.2 IG_like 47..135 CDD:214653 23/94 (24%)
Ig strand B 56..60 CDD:409353 1/3 (33%)
Ig strand C 68..72 CDD:409353 1/4 (25%)
Ig strand E 101..105 CDD:409353 1/3 (33%)
Ig strand F 115..120 CDD:409353 2/4 (50%)
Ig strand G 128..131 CDD:409353 1/2 (50%)
Ig_3 138..207 CDD:464046 16/79 (20%)
IG_like 231..312 CDD:214653 11/80 (14%)
Ig strand B 241..245 CDD:409353 0/3 (0%)
Ig strand C 254..258 CDD:409353 2/3 (67%)
Ig strand E 280..284 CDD:409353 2/3 (67%)
Ig strand F 294..299 CDD:409353 4/4 (100%)

Return to query results.
Submit another query.