DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr3 and Ptprq

DIOPT Version :9

Sequence 1:NP_001014459.2 Gene:dpr3 / 3346208 FlyBaseID:FBgn0053516 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001357916.1 Gene:Ptprq / 237523 MGIID:1096349 Length:2301 Species:Mus musculus


Alignment Length:561 Identity:120/561 - (21%)
Similarity:184/561 - (32%) Gaps:190/561 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KQICNINLCGFLR-RSGADDVDVIEPR-SPGHAADVDVAA---AAAGATTS--VAATAAAAAAAT 94
            |::|......:.| |:..|.::|:... :||...::.|||   |..|..:.  :..||.:|... 
Mouse    95 KEVCPWMQTAYTRVRAKPDSLEVLLTNLNPGTTYEIKVAAENSAGIGVFSDPFLFQTAESAPGK- 158

  Fly    95 TRAAATTRAVIIIMALVVSIMQQQQQSLLW-----PFCNG------LAAAAASTG--------QP 140
                        ::.|.|..:.....:|:|     |  ||      ::...|.:|        :.
Mouse   159 ------------VVNLTVEALNYSAVNLIWYLPRQP--NGKITSFKISVKHARSGIVVKDVSIKV 209

  Fly   141 DD--SGDGPTLS----TFLSSSQSQSP-----SPPAASASASSPSSFS----------SFAVAH- 183
            :|  ||..|..:    :||.|:.|.||     :||..:...|:..:.:          ||.|.| 
Mouse   210 EDLLSGKLPECNENSDSFLWSTTSPSPTLSRATPPLRTTHLSNTLARNKISSVWKEPISFVVTHL 274

  Fly   184 GPQTEATNHTFKSLAFLDASFGSDLFAQTDAKRERSGAADEESQDADTSQSLPIFDFGMPRN-IT 247
            .|.|     |:             || :..|....:|..|  |....|.:|:|   .|.|:| ||
Mouse   275 RPYT-----TY-------------LF-EVSAVTTEAGYID--STIVRTPESVP---EGPPQNCIT 315

  Fly   248 GR-TGHTEAIIKCRVDSLHDKSVSWIRKRDLHILTVGTATY---------------TSDKRFQVT 296
            |. ||..             .|:||    |...:..|..:|               |.|.||..|
Mouse   316 GNVTGKA-------------FSISW----DPPAIVTGKFSYRVELYGPTGRILDNSTKDLRFVFT 363

  Fly   297 ESKDSREWTLHVKAPLAKDSGIYECQVNTEPKMSMA-----------FQLNIIEISPDAKAVISG 350
            .......:.::|.|         |......||.:::           |.|.|:|:......|...
Mouse   364 HLTPFTMYDVYVAA---------ETSAGVGPKSNLSVFTPPDVPGAVFDLQIVEVEATEIRVSWR 419

  Fly   351 PPDLHFKAGSAIILNCLVQQPSVKDIGPIYWYRGEHMITPFDADDGQPEIP-------------A 402
            .|    :..:.||....| :.||.:.|.|.   ...::|..|.....|..|             .
Mouse   420 KP----RQPNGIISQYRV-KVSVLESGVIL---ENTLLTGQDEYINNPMTPEIMNLVDPMIGFYE 476

  Fly   403 GRGE---------------HPQGIPEDTSPNDIMSEVDL--QMEFATRIAMESQLGDTLKSRLRI 450
            |.||               ||...|..|...|..|.|.:  :.::.|.||.| .|...:: ||..
Mouse   477 GSGEMSSDLHSLASFIYNSHPHDFPARTRVEDQRSPVVVATRNQYMTDIAAE-HLSYVIR-RLVP 539

  Fly   451 SNAQTTDTGNYTCQ----PT-----TASSASVLVHVINDEN 482
            ....|.....:|..    ||     |.......:.:||.:|
Mouse   540 FTEHTISVSAFTVMGEGPPTVLTVRTREQVPSSIQIINYKN 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr3NP_001014459.2 Ig 243..330 CDD:299845 23/103 (22%)
IG_like 243..329 CDD:214653 22/102 (22%)
Ig 350..464 CDD:299845 31/143 (22%)
IG_like <441..477 CDD:214653 7/44 (16%)
PtprqNP_001357916.1 FN3 57..151 CDD:238020 13/55 (24%)
FN3 308..393 CDD:238020 24/110 (22%)
fn3 399..>441 CDD:365830 11/46 (24%)
FN3 570..654 CDD:238020 3/11 (27%)
fn3 668..744 CDD:365830
FN3 762..850 CDD:238020
fn3 857..934 CDD:365830
FN3 951..1049 CDD:238020
FN3 1056..1137 CDD:238020
FN3 1152..1233 CDD:238020
FN3 1247..1337 CDD:238020
FN3 1342..1421 CDD:238020
FN3 1432..1535 CDD:238020
FN3 1542..1638 CDD:238020
FN3 1645..1734 CDD:238020
UP_III_II 1759..1928 CDD:297589
R-PTPc-Q 2033..2256 CDD:350464
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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