DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr3 and rig-3

DIOPT Version :9

Sequence 1:NP_001014459.2 Gene:dpr3 / 3346208 FlyBaseID:FBgn0053516 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_509155.1 Gene:rig-3 / 180958 WormBaseID:WBGene00004370 Length:487 Species:Caenorhabditis elegans


Alignment Length:364 Identity:65/364 - (17%)
Similarity:120/364 - (32%) Gaps:109/364 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 FLDASFGSDLFAQTDAKRERSGAADEESQDADTSQSLPIFDFGMPRNITGRTGHTEAIIKCRVDS 263
            |:.|...||..:..:|   .......|:.|.||:            .||.|.| .:.::.|..:|
 Worm    17 FVSAVSASDSPSSNEA---NPIVISSEAMDYDTN------------TITVREG-KKLMVSCVFES 65

  Fly   264 ---LHDKSVSWIRKRDLHILTVGTATYTSDKRFQVTESKDS--REWTLHVKAPLAKDSGIYECQV 323
               :|...:.|.:....:|......:..|    .:...|.|  |:.:||..:...:|:|:|.|..
 Worm    66 DEQIHKSDLLWKQANGNNIDGESNPSLFS----VILNEKGSKHRKTSLHFSSVHTRDTGLYTCTG 126

  Fly   324 NTEPKMSMAFQLNII---EISPDAKAVISGPPDLHFKAGSAIILNCLVQQPSVKDIGPIYWY--- 382
            .|....:....:.::   .|..:.|..:.|.     ..|..|.::|.|:.||.|:  |:...   
 Worm   127 RTAGGENFEKTIKLVVLPAIEWNDKDTVKGA-----LLGEPITIDCGVKGPSGKE--PMIQMTNG 184

  Fly   383 RGEHMITPFDAD-----DGQPEIPAGRGEHPQ--------GIPEDTSPND--IMSEVDLQMEFAT 432
            .||    |.|.:     ..:..|.:.:.||.:        .:.::||..:  ::...|:.:|..|
 Worm   185 NGE----PLDEEIWTIAGNEATIDSLKKEHAELTVSCITIEMHQETSKEEFPVVDRKDVNIEVYT 245

  Fly   433 RIAMESQ---------------------------------------------------LGDTLKS 446
            ....|::                                                   :|.:..:
 Worm   246 LPEFETEESVQYTVIDNHVRDAIIYCNVTHSFPPVRHYTFYHGDEEIKMSDKFNIFVNVGVSQGA 310

  Fly   447 RLRISNAQTTDTGNYTCQPTTASSASV-LVHVINDENPA 484
            .|:|.|....|.|.|.|:.....:.|. .:|:.....||
 Worm   311 HLKIHNVNENDLGTYKCEANNIKAKSYHTIHLREANAPA 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr3NP_001014459.2 Ig 243..330 CDD:299845 20/91 (22%)
IG_like 243..329 CDD:214653 20/90 (22%)
Ig 350..464 CDD:299845 29/182 (16%)
IG_like <441..477 CDD:214653 9/36 (25%)
rig-3NP_509155.1 IG_like 48..142 CDD:214653 20/98 (20%)
Ig 267..341 CDD:319273 9/73 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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