DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr3 and ncam2

DIOPT Version :9

Sequence 1:NP_001014459.2 Gene:dpr3 / 3346208 FlyBaseID:FBgn0053516 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_012811963.1 Gene:ncam2 / 100151722 XenbaseID:XB-GENE-1217730 Length:865 Species:Xenopus tropicalis


Alignment Length:303 Identity:56/303 - (18%)
Similarity:100/303 - (33%) Gaps:111/303 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 TDAKRERSGAADEESQDADTSQSLPIFDFGMPRNITGRTGHTEAIIKCRVDSLHDKSVSWIRKRD 276
            ||:|    |.|.|.:...:..|.|...|...|:..  :.|....:: |.|.|.....|.|:..|:
 Frog   125 TDSK----GHAQEATVVLEIYQKLTFEDVPSPQEF--KRGENAEVL-CLVSSSPAPMVRWLNNRE 182

  Fly   277 LHILTVGTATYTSDKRFQVTESKDSREWTLHVKAPLAKDSGIYECQVNTEPKMSMAFQLNIIEIS 341
                   ..|...|:||.:..:.:     |.:|....:|.|||.|:...|.:..:.|:       
 Frog   183 -------DVTDIDDRRFAMLPNNN-----LQIKNISKRDEGIYRCEGRVEVRGEIDFR------- 228

  Fly   342 PDAKAVISGPPDLHFKAGSAIILNCLVQQPS-------VKDI--------GP---IYWYRGEHMI 388
             |...:::.||::            |.||.|       ::||        .|   |.|:|...::
 Frog   229 -DISVIVNVPPEI------------LAQQRSFNATADRLEDITLFCRATGSPKPYITWHRNGKLV 280

  Fly   389 TPFDADDGQPEIPAGRGEHPQGIPEDTSPNDIMSEVDLQMEFATRIAMESQLGDTLKSRLRISNA 453
                                    |:....|:..:                     .:.|.:.|.
 Frog   281 ------------------------EENEKYDLRED---------------------NTELTVKNI 300

  Fly   454 QTTDTGNYTCQPTTASSAS---------VLVHVINDENPAAMQ 487
            .:||:|.|.|:.|..:..:         |..|::..:|...::
 Frog   301 ISTDSGLYVCRATNKAGFTEKQSFLQVFVQPHIVQLQNETTIE 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr3NP_001014459.2 Ig 243..330 CDD:299845 20/86 (23%)
IG_like 243..329 CDD:214653 20/85 (24%)
Ig 350..464 CDD:299845 20/131 (15%)
IG_like <441..477 CDD:214653 9/44 (20%)
ncam2XP_012811963.1 Ig 50..141 CDD:386229 6/19 (32%)
IG_like 150..234 CDD:214653 22/106 (21%)
Ig 237..330 CDD:386229 22/149 (15%)
Ig 329..426 CDD:386229 3/15 (20%)
IG_like 442..520 CDD:214653
FN3 525..617 CDD:238020
fn3 623..706 CDD:365830
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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