DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33543 and DIP-epsilon

DIOPT Version :9

Sequence 1:NP_001014458.3 Gene:CG33543 / 3346207 FlyBaseID:FBgn0053543 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster


Alignment Length:517 Identity:114/517 - (22%)
Similarity:192/517 - (37%) Gaps:110/517 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIALCSLLLL----LLSQNAAILGQLDSTSSGGSG-TGGAPPDR-----------------PPTP 46
            |.|:.|.|.:    |::.:.|:  ..|:.|.|.:| .||:..:.                 |...
  Fly     5 LEAISSFLYVGLGCLIASSVAL--STDTGSEGNAGNVGGSTLNNVISEDPEFTDVIENITVPAGR 67

  Fly    47 PLSLQPSTPSI-------THFVNESFIIFCQTVQKDIDTKWRDPRGQTRENTKGRVHIEKKTTGL 104
            .:.|..|..::       .||...:.:    ||...:.|  |:||.....:..     :|..|..
  Fly    68 NVKLACSVKNLGSYKVAWMHFEQSAIL----TVHNHVIT--RNPRISVTHDKH-----DKHRTWF 121

  Fly   105 LALVFEHIALEDRGNWTCEVNGNRNGNRNVNVEREFLASFELLVNQKISFGKTEQVQSVREGRDA 169
            |.:  .::..||||.:.|::|       .|..:.:: ...:::|...|....|.....||||.:.
  Fly   122 LHI--NNVQEEDRGRYMCQIN-------TVTAKTQY-GFVKVVVPPNIDDALTSSDIIVREGDNV 176

  Fly   170 MVNCFVEGMPAPEVSWLYNGEYINTVNST--KHNRLSNGLYIRNVSQADAGEYTCRAMR-ITPTF 231
            .:.|..:|.|.|.:.|..:......:|.|  .|:..::.|.:..:|:...|.|.|.|.. :.|:.
  Fly   177 TLRCKAKGSPEPTIKWKRDDGNKIVINKTLEVHDLETDSLELERISRLHMGAYLCIASNGVPPSV 241

  Fly   232 SDSDQITILLRIQHKPH-WFFNETLPVQYAYVGGAVNLSCDAMGEPPPSFTWLHNNKGIVGFNHR 295
            |.    .|.:.:...|. |..::.:.:.   :|..:.|.|.....|.....|...|..::..:.:
  Fly   242 SK----RIKVSVDFSPMVWIPHQLVGIP---IGFNITLECFIEANPTSLNYWTRENDQMITESSK 299

  Fly   296 IFV------ADYGATLQLQMKN--ASQFGDYKCKVANPLGMLERVIKLRPGPKPL---GPRRFQL 349
            ...      ..|.||::|.:.|  :|.:|:|||...||.|.::..|||.....|.   .|....|
  Fly   300 YKTETIPGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPPTTQPPPTTTTL 364

  Fly   350 KKLYTNGFE--LD--IQTPRMSNVSDEMQIYGYRVAYMSDTEFKFSAGNWSYAKQRDFSFHGGKH 410
            ::..|...|  ||  |.||...|        |..:.....|....::|..|              
  Fly   365 RRTTTTAAEIALDGYINTPLNGN--------GIGIVGEGPTNSVIASGKSS-------------- 407

  Fly   411 FIIPHLETNTTYLMRAASRNLAGLS----DWSPVKVFTTAAGCSWSPWLYPSYGLILALIWT 468
              |.:| :|...:.: :.:.|.|.|    |||..|...:......|.|  |....||||:.|
  Fly   408 --IKYL-SNLNEIDK-SKQKLTGSSPKGFDWSKGKSSGSHGNLMASSW--PLICCILALLTT 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33543NP_001014458.3 IGc2 165..224 CDD:197706 15/60 (25%)
IG_like 256..336 CDD:214653 21/87 (24%)
IGc2 263..327 CDD:197706 18/71 (25%)
FN3 341..445 CDD:238020 25/114 (22%)
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 21/116 (18%)
Ig 69..139 CDD:143165 18/82 (22%)
IG_like 165..249 CDD:214653 21/87 (24%)
IGc2 172..237 CDD:197706 16/64 (25%)
IG_like 267..348 CDD:214653 21/80 (26%)
Ig 270..339 CDD:299845 17/68 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442836
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.