Protein Alignment CG33543 and Negr1

DIOPT Version :10

• Sequence 1: NP_001014458.3
• Gene: CG33543 / 3346207
• FlyBaseID: FBgn0053543
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: XP_063138498.1
• Gene: Negr1 / 59318
• RGDID: 708416
• Length: 423
• Species: Rattus norvegicus
• Alignment Length: 385
• Identity: 81/385 - (21%)
• Similarity: 132/385 - (34%)
• Gaps: 125/385 - (32%)

  Fly     4 LIALCSLL---------------LLLLSQNAAILG-QLDSTSSGGSGTGGAPPDRPPTPPLSLQP 52
            |::|||.|               :|:...:.|:|. .|:..:|.|:
  Rat    19 LLSLCSCLPAGQSVDFPWAAVDNMLVRKGDTAVLRCYLEDGASKGA------------------- 64

  Fly    53 STPSITHFVNESFIIFCQTVQKDIDTKWR-DPRGQTRENTKGRVHIEKKTTGLLALVFEHIALED 116
                   ::|.|.|||..      ..||. ||          ||.|........:|..:::.:.|
  Rat    65 -------WLNRSSIIFAG------GDKWSVDP----------RVSISTLNKRDYSLQIQNVDVTD 106

  Fly   117 RGNWTCEVNGNRNGNRNVNVEREFLASFELLVNQKISFGKTEQVQSVREGRDAMVNCFVEGMPAP 181
            .|.:||.|. .::..|.:.|        .|.|.............::.||.:..:.|...|.|.|
  Rat   107 DGPYTCSVQ-TQHTPRTMQV--------HLTVQVPPKIYDISNDMTINEGTNVTLTCLATGKPEP 162

  Fly   182 EVSWLY---------NGEYINTVNSTKHNRLSNGLYIRNVSQADAGEYTCRAMRITPTFSDSDQI 237
            .:||.:         ||:|::               |..:::..||||.|.|.. ..:|.|..::
  Rat   163 AISWRHISPSAKPFENGQYLD---------------IYGITRDQAGEYECSAEN-DVSFPDVKKV 211

  Fly   238 TILLRIQHKPHWFFNETLPVQYAYVGGAVN------LSCDAMGEPPPSFTWLHNNKGIVGFNHRI 296
            .:::..           .|.......|.|.      :.|:..|.|||:|.|....|.:......|
  Rat   212 RVVVNF-----------APTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKRLFNGQQGI 265

  Fly   297 FVADYGATLQLQMKNASQ--FGDYKCKVANPLGM------LERVIK-------LRPGPKP 341
            .:.::.....|.:.|.:|  ||:|.|..||.||.      |.::|:       ..||..|
  Rat   266 IIQNFSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNQIIEPTTSSPVTSPGQYP 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG33543	NP_001014458.3	Ig	<71..>123	CDD:472250	11/52 (21%)
		Ig strand E	105..109	CDD:409353	1/3 (33%)
		Ig strand F	119..123	CDD:409353	1/3 (33%)
		Ig	153..239	CDD:472250	20/94 (21%)
		Ig strand B	169..173	CDD:409353	0/3 (0%)
		Ig strand C	182..186	CDD:409353	1/3 (33%)
		Ig strand E	205..209	CDD:409353	0/3 (0%)
		Ig strand F	219..224	CDD:409353	3/4 (75%)
		Ig strand G	232..235	CDD:409353	1/2 (50%)
		IG_like	256..336	CDD:214653	25/100 (25%)
		Ig strand B	266..270	CDD:409353	1/9 (11%)
		Ig strand C	279..283	CDD:409353	1/3 (33%)
		Ig strand E	302..309	CDD:409353	1/6 (17%)
		Ig strand F	317..322	CDD:409353	2/4 (50%)
		FN3	341..445	CDD:238020	1/1 (100%)
Negr1	XP_063138498.1	None