DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33543 and igsf9bb

DIOPT Version :9

Sequence 1:NP_001014458.3 Gene:CG33543 / 3346207 FlyBaseID:FBgn0053543 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_009293693.1 Gene:igsf9bb / 569554 ZFINID:ZDB-GENE-091112-15 Length:1439 Species:Danio rerio


Alignment Length:542 Identity:114/542 - (21%)
Similarity:181/542 - (33%) Gaps:200/542 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PLSLQP--------STPSITHFVNESFIIFCQTVQKDIDTKWRDPRGQTRENTKGRVHIEKKTTG 103
            ||:.||        ..| |..|:|..|      ....:|.::           .||..:..|:  
Zfish    50 PLNGQPYVVEWFKFGVP-IPFFINFRF------YPPHVDPEY-----------AGRASLHGKS-- 94

  Fly   104 LLALVFEHIALEDRGNWTCEVNGNRNGNRNVNVEREFLASF------ELLVNQKISFGKT-EQVQ 161
              :|..|.:..||:|.:.|:|         :.:|::: .:|      .|.||...:|..| .|..
Zfish    95 --SLRIERVRSEDQGWYECKV---------LMLEQQY-HTFHNGSWVHLTVNAPPTFTDTPPQYV 147

  Fly   162 SVREGRDAMVNCFVEGMPAPEVSWLYNGEYINTVNSTKHNRLSNGLYIRNVSQADAGEYTCRAMR 226
            ..:||....::|...|.|.|.||||..|..:.  :|||:......|.:.::|:.|.|.|||||  
Zfish   148 EAKEGGSITLSCTAFGNPKPSVSWLREGNPVQ--DSTKYKVSDGSLTLVSISREDRGAYTCRA-- 208

  Fly   227 ITPTFSDSDQI--TILLRIQHKPH--------------------------------WFFNE---- 253
                :|:..:.  |..|.:|..|.                                ||:.|    
Zfish   209 ----YSEQGEAVHTTRLLVQGPPFIVSPPENITVNISQDAFFTCQAEAYPGNLTYTWFWEEDNVF 269

  Fly   254 ---------------TLPVQYAYVGGAVNLSC---DAMGEPPPSFTWL--HNNKGIVGFNHRIFV 298
                           :|.:.......|...:|   :::|.||.:..:|  |....::.....|:|
Zfish   270 FKNDLKRRVSILIDGSLIISQVKPEDAGKYTCSPSNSLGRPPSASAYLTVHYPARVINMPPVIYV 334

  Fly   299 A----DY-------------------GATLQL-------QMKNAS---------QFGDYKCKVAN 324
            |    .|                   |..|::       ||::.|         ..|.|.|...|
Zfish   335 AIGLPGYIRCPVDANPPVTSVKWKKDGLPLRIEKYPGWSQMEDGSIRVSEVTEDSLGTYTCVPYN 399

  Fly   325 PLGMLERVIKLRPGPKPLGP--RRFQLKKLYTNGFELDIQTPR------------MSNVSDEMQI 375
            .||.:        ||.|..|  .:...|.|...|.|...:..|            ..|::...::
Zfish   400 SLGTM--------GPSPPAPLVLKDPPKFLVVPGGEYRQEAGRELVIPCEAEGDPFPNITWRKKV 456

  Fly   376 -----YGYRVAYMSDTEFKFSAGNWSYAKQRDFSFHGGKHFIIPHLETNTTYLMRAASRNL--AG 433
                 ..:.|......:||      |.:|:.    ||....:..::.|:.|     ||.:|  .|
Zfish   457 GKPSRSKHNVLPRGSLQFK------SLSKED----HGEWECVASNVATSIT-----ASTHLLVIG 506

  Fly   434 LSDWSPVKVF----TTAAGCSW 451
            .|..:|.||.    ||:|..||
Zfish   507 TSPHAPAKVHVTVSTTSANVSW 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33543NP_001014458.3 IGc2 165..224 CDD:197706 21/58 (36%)
IG_like 256..336 CDD:214653 22/123 (18%)
IGc2 263..327 CDD:197706 20/107 (19%)
FN3 341..445 CDD:238020 25/128 (20%)
igsf9bbXP_009293693.1 IG_like 30..113 CDD:214653 19/84 (23%)
Ig 41..113 CDD:143165 19/84 (23%)
IG_like 144..223 CDD:214653 27/86 (31%)
IGc2 151..208 CDD:197706 21/58 (36%)
I-set 227..319 CDD:254352 11/91 (12%)
Ig <263..319 CDD:299845 8/55 (15%)
Ig_2 326..414 CDD:290606 19/95 (20%)
IG_like 329..403 CDD:214653 14/73 (19%)
IG_like 424..504 CDD:214653 16/94 (17%)
Ig 440..504 CDD:299845 13/78 (17%)
FN3 509..604 CDD:238020 8/20 (40%)
FN3 620..704 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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