DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33543 and igsf9a

DIOPT Version :9

Sequence 1:NP_001014458.3 Gene:CG33543 / 3346207 FlyBaseID:FBgn0053543 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_005155702.1 Gene:igsf9a / 557459 ZFINID:ZDB-GENE-060503-288 Length:1619 Species:Danio rerio


Alignment Length:469 Identity:94/469 - (20%)
Similarity:168/469 - (35%) Gaps:99/469 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LSQNAAILGQLDSTSSGGSGT--------GGAPPDRPPTPPLSLQPSTPSITHFVNESFIIFCQT 71
            :|:.||...|..:::|.|:.|        |         ||:.:.|.:.::.: :::...:.||.
Zfish   195 VSREAAGQYQCYTSNSEGNATHVTRLKIIG---------PPVIIIPPSDTVLN-MSQDAKLKCQA 249

  Fly    72 VQKDIDTKWRDPRGQTR------------ENTKGRVHIEKKTTGLLALVFEHIALEDRGNWTC-E 123
            .        .||...|.            ::.|.|:.:....|    |:...:|.||.||:|| .
Zfish   250 E--------ADPPNMTYVWQRQGVDIYHIDSLKSRIKVIVDGT----LLISRLAPEDSGNYTCMP 302

  Fly   124 VNG---NRNGNRNVNVEREFLASFELLVNQKISFGKTEQVQSVREGRDAMVNCFVEG-MPAPEVS 184
            .||   :.:.:..:.|:.    ..:::...|::|..|        |....:.|.|.. .|...:.
Zfish   303 TNGLPVSPSASAVLTVQH----PAQVIQMPKLTFLPT--------GMRGAIVCPVRAEPPLSHID 355

  Fly   185 WLYNGEYINTVNSTKHNRLSNG-LYIRNVSQADAGEYTCRAMRITPTFSDSDQITILLRIQHKPH 248
            |:.:|:.::..........|:| :.|..|:...||.|.|.......|...|:..|::|  |..|.
Zfish   356 WIKDGKPLDLGMYPGWTLASDGSIVIATVNDDAAGVYICTPYNSFGTTGQSEPTTVIL--QDPPS 418

  Fly   249 WFFNETLPVQYAY-VGGAVNLSCDAMGEPPPSFTWLHNNKGIVGFNHRIFVADYGATLQLQMKNA 312
              |..:...:|.. ||..:.:.|..:|.|.|...|    :.|......:|......:|.|...:.
Zfish   419 --FKVSPRNEYRQDVGTMLVIPCQMVGNPAPKVNW----RKIGAATRSLFTLAGNGSLILHPLSK 477

  Fly   313 SQFGDYKCKVANPLGMLE---RVIKLRPGPKPLG-----PRRFQLKKLYTNGFELDIQTPRMSNV 369
            ...|:::|..:|.:..:.   .|:.|...|..:.     |...|....:..||            
Zfish   478 DHQGEWECSSSNRVATVSIKTMVLVLGTSPHAVSSVSVIPGTNQANVSWVAGF------------ 530

  Fly   370 SDEMQIYGYRVAYMSDTEFKFSAGNWSYAKQRDFSFHG---GKHFIIPHLETNTTYLMRAASRNL 431
             |......:.|.|.     :.|||. :..||...||..   ....::.:|...|.|.....::|.
Zfish   531 -DGGYTQTFTVWYK-----QVSAGR-TEEKQEWLSFSDLSTENSLLVTNLLPATEYQFSVMAQNK 588

  Fly   432 AGLSDWSPVKVFTT 445
            .|...:|.:...||
Zfish   589 IGTGPFSEIITVTT 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33543NP_001014458.3 IGc2 165..224 CDD:197706 14/60 (23%)
IG_like 256..336 CDD:214653 16/83 (19%)
IGc2 263..327 CDD:197706 13/63 (21%)
FN3 341..445 CDD:238020 20/111 (18%)
igsf9aXP_005155702.1 IG_like 27..110 CDD:214653
Ig 35..111 CDD:299845
I-set 140..221 CDD:254352 7/25 (28%)
IGc2 151..212 CDD:197706 5/16 (31%)
Ig 233..318 CDD:299845 18/97 (19%)
I-set 233..318 CDD:254352 18/97 (19%)
Ig <349..402 CDD:299845 11/52 (21%)
IG_like 423..502 CDD:214653 16/82 (20%)
Ig 435..498 CDD:143165 12/66 (18%)
FN3 507..602 CDD:238020 21/113 (19%)
fn3 614..696 CDD:278470
PHA02666 1105..>1312 CDD:222914
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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