DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33543 and wrapper

DIOPT Version :9

Sequence 1:NP_001014458.3 Gene:CG33543 / 3346207 FlyBaseID:FBgn0053543 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster


Alignment Length:505 Identity:99/505 - (19%)
Similarity:177/505 - (35%) Gaps:144/505 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LCSLLLLLLSQNAAILGQLDSTSSGGSGTGGAPPDRP-PTPPLSLQPSTPSITHFVNESFIIFCQ 70
            :||::..||:  |.||||:.:.....:....:...:. ||...:.:..|..:...:|..| .:.:
  Fly     5 MCSVVRCLLA--ALILGQVQAELDFNNDLENSQKFKSIPTTVKTYENDTVQLPCTLNTPF-RYVR 66

  Fly    71 TVQKD---IDTK------------WRDPRGQTRENTKGRVHIEKKTTGLLALVFEHIALEDRGNW 120
            ..:.|   :|::            |  |.|                    :|...::...|.|::
  Fly    67 WHRDDVALVDSRHPELPPPDRIMLW--PNG--------------------SLQVANVQSSDTGDY 109

  Fly   121 TCEVNGNRNGNRNVNVEREFLASFELLVNQKIS-FGKTEQVQSVREGRDAMVNCFVEGMPAPEVS 184
            .||:|.:..     :|.::.....:|.....|. ...|||    |.|....|.|..:|:|.|.::
  Fly   110 YCEMNSDSG-----HVVQQHAIEVQLAPQVLIEPSDLTEQ----RIGAIFEVVCEAQGVPQPVIT 165

  Fly   185 WLYNGEYINTVNSTKHNRLSNGLYIRNVSQADAGEYTCRAMRITPTFSDSDQITILLRIQHKPHW 249
            |..||..|...::| .||.|..|.|::.:|  ||...|.|   :....:.....:.|.:...|..
  Fly   166 WRLNGNVIQPQSNT-GNRQSLILEIKSRNQ--AGLIECVA---SNGVGEPAVANVYLHVLFSPEV 224

  Fly   250 FFNETLPVQYAYVGGAVNLSCDAMGEPPPSFTWLHN-------------------NKGIVGFNHR 295
            ...:  ||.|..:|...:|.|.....|..:..|.|:                   |:.:   :|.
  Fly   225 SIPQ--PVVYTKLGSRAHLECIVEAAPAATVKWFHHGLPVALGAHSTTHESELQTNRSV---DHY 284

  Fly   296 IFVADYGATLQLQMKNASQFGDYKCKVANPLGMLERVIKLRPGPKP----LGPRR---------F 347
            :....:...:: .::|| ..|.|:|:.:|.:.:....::|...|.|    :.|..         :
  Fly   285 VNAVRHMLVVK-SVRNA-DMGQYECRASNQISVKSGSVELTGRPMPCLFKINPGTQSSTSHVLVW 347

  Fly   348 QLKKLY-TNGFELDIQTPRMSNVSDEMQIYGYRVAYMSDTEFKFSAGNWSYAKQRDFSFHGGKHF 411
            |.:.|. ...|:|..:....:||:.:::.                  ||:             ..
  Fly   348 QTESLLPIMEFKLKFRQIPSNNVTRQVRT------------------NWT-------------EL 381

  Fly   412 IIPHLETN-----TTYLMR-----------AASRNLAGLSDWSPVKVFTT 445
            .||...||     |||.:.           ..:||..|.||.|.:..|.|
  Fly   382 TIPAQATNGLIYITTYTLHGLQPASLYEVSVLARNSFGWSDNSKIVRFAT 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33543NP_001014458.3 IGc2 165..224 CDD:197706 20/58 (34%)
IG_like 256..336 CDD:214653 17/98 (17%)
IGc2 263..327 CDD:197706 14/82 (17%)
FN3 341..445 CDD:238020 24/133 (18%)
wrapperNP_477404.1 Ig 41..124 CDD:299845 17/110 (15%)
IG_like 41..118 CDD:214653 16/99 (16%)
IG_like 145..218 CDD:214653 23/78 (29%)
Ig 147..219 CDD:299845 22/77 (29%)
I-set 224..323 CDD:254352 17/105 (16%)
IGc2 236..314 CDD:197706 14/82 (17%)
FN3 339..431 CDD:238020 22/122 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.