DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33543 and Sdk2

DIOPT Version :9

Sequence 1:NP_001014458.3 Gene:CG33543 / 3346207 FlyBaseID:FBgn0053543 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_006247755.1 Gene:Sdk2 / 360652 RGDID:1310397 Length:2175 Species:Rattus norvegicus


Alignment Length:365 Identity:75/365 - (20%)
Similarity:109/365 - (29%) Gaps:156/365 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 TGGAPPDRPP---TPPLSLQPSTPSITHFVNESFIIFCQTVQK-DIDTKWRDPRGQTRENTKGRV 95
            :.||..|.||   |.|:..|      .|......::.|..... .::.||..   ..||.|:..:
  Rat    20 SAGAQDDVPPYFKTEPVRTQ------VHLEGNRLVLTCMAEGSWPLEFKWLH---NNRELTRFSL 75

  Fly    96 HIEKKTTGLLALVFEHIALEDR---GNWTCEVNGNRNG---NRNVNVEREFLASFELLVNQKISF 154
            ......|.|           ||   |.:.|.|. ||.|   .|...|:..::.|||         
  Rat    76 EYRYMITSL-----------DRTHAGFYRCIVR-NRMGALLQRQTEVQVAYMGSFE--------- 119

  Fly   155 GKTEQVQSVREGRDAMVNC-FVEGMPAPEVSWLYNGE---------------------------- 190
             :.|:.|||..|..|::.. .:...|.|:|:|..:|.                            
  Rat   120 -EGEKHQSVSHGEAAVIKAPRISSFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGR 183

  Fly   191 -YINTVNSTKHNR---------------------------------------------------- 202
             |:..||....:.                                                    
  Rat   184 YYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLI 248

  Fly   203 ------------LSNG-------LYIRNVSQADAGEYTCRAM----RITPTFSDSDQITILLRIQ 244
                        ||||       |.|.|...:|||.|.|.||    .:.|. :....:::|    
  Rat   249 KLHIVWKKDGALLSNGISDYNRRLTITNPMVSDAGYYECEAMLRSSSVAPV-TRGAYLSVL---- 308

  Fly   245 HKPHWFFNETLPVQY--AYVGGAVNLSCDAMGEPPPSFTW 282
             :|..|..|  |.::  |.:...|::.|.|.|.||||.||
  Rat   309 -EPPQFVRE--PERHITAEMEKVVDIPCRAKGVPPPSITW 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33543NP_001014458.3 IGc2 165..224 CDD:197706 22/159 (14%)
IG_like 256..336 CDD:214653 12/29 (41%)
IGc2 263..327 CDD:197706 10/20 (50%)
FN3 341..445 CDD:238020
Sdk2XP_006247755.1 IG_like 43..112 CDD:214653 18/83 (22%)
IGc2 43..101 CDD:197706 15/72 (21%)
IG_like 123..206 CDD:214653 13/82 (16%)
Ig 135..191 CDD:299845 7/55 (13%)
IG_like 225..307 CDD:214653 15/82 (18%)
IGc2 236..289 CDD:197706 12/52 (23%)
I-set 311..400 CDD:254352 14/37 (38%)
Ig 329..397 CDD:143165 10/17 (59%)
I-set 405..495 CDD:254352
Ig 419..495 CDD:299845
Ig 505..589 CDD:299845
IG_like 505..589 CDD:214653
FN3 593..684 CDD:238020
FN3 696..789 CDD:238020
FN3 797..893 CDD:238020
FN3 898..986 CDD:238020
FN3 996..1090 CDD:238020
FN3 1102..1197 CDD:238020
FN3 1204..1293 CDD:238020
FN3 1304..1397 CDD:238020
FN3 1403..1487 CDD:238020
FN3 1506..1619 CDD:238020
FN3 1629..1722 CDD:238020
FN3 1727..1808 CDD:238020
FN3 1840..1919 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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