DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33543 and sdk

DIOPT Version :9

Sequence 1:NP_001014458.3 Gene:CG33543 / 3346207 FlyBaseID:FBgn0053543 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster


Alignment Length:637 Identity:123/637 - (19%)
Similarity:200/637 - (31%) Gaps:231/637 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLLSQNAAILGQLDSTSSGGSGTGGAPPDRPPT------PPLSLQPSTPSITHFVNESFIIFCQ 70
            |.||..|::..|:.  |......:||.|......      |||...|...       |:|..|..
  Fly   321 LALLQANSSHSGEY--TCQVRLRSGGYPAVSASARLQILEPPLFFTPMRA-------ETFGEFGG 376

  Fly    71 TVQKDID--------TKW-RDPRGQTRENTKGRVHIEKKTTGLLALVFEHIALEDRGNWTCEVNG 126
            .||...|        .|| |:..........||..:....|    ||.:.:.|:|...:.|..  
  Fly   377 QVQLTCDVVGEPTPQVKWFRNAESVDAHIESGRYTLNTDNT----LVIKKLILDDAAMFQCLA-- 435

  Fly   127 NRNGNRNVNVEREFLASFELLVNQKISFGKTEQVQSVR--------------------------- 164
                   :|...|..||..|.|..|.:..:.:::...|                           
  Fly   436 -------INEAGENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKE 493

  Fly   165 -------------------EGRDAMVNCFVEGMPAPEVSWLYNGEYINTVNSTKHNRLSNGLYIR 210
                               :|:||.::|...|.|.|.::|:||...:..::|......|..|.|.
  Fly   494 FRFASAPIMELPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVDISSRVQILESGDLLIS 558

  Fly   211 NVSQADAGEYTCRAMRITPTFSDSDQITILLRIQ-HKPHWFFNETLPVQ-YAYVGGAVNLSCDAM 273
            |:...|||.|.|.......:......:::|:|.| .:|        ||. ...:|....|.|...
  Fly   559 NIRSVDAGLYICVRANEAGSVKGEAYLSVLVRTQIIQP--------PVDTTVLLGLTATLQCKVS 615

  Fly   274 GEP--PPSFTWLHNNKGI--VGFNHRIFVADYGATLQLQMKNASQFGDYKCKVANPLGMLERVIK 334
            .:|  |.:..|....:..  :..:.||.|...| .|::|...||..|.|.|.|.:|.|...|..:
  Fly   616 SDPSVPYNIDWYREGQSSTPISNSQRIGVQADG-QLEIQAVRASDVGSYACVVTSPGGNETRAAR 679

  Fly   335 LRPGPKPLGPRRFQLKKL-----------YTNGFELDIQTP------------------------ 364
            |.....|..|...::::|           :|.||  |..:|                        
  Fly   680 LSVIELPFPPSNVKVERLPEPQQRSINVSWTPGF--DGNSPISKFIIQRREVSELGPVPDPLLNW 742

  Fly   365 --RMSNVSDEMQ-----------IYGYRVAYM------SDTE----------------------- 387
              .:||||.:.:           :|.:||:.:      |.:|                       
  Fly   743 ITELSNVSADQRWILLENLKAATVYQFRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSA 807

  Fly   388 -------------------------------FKFSAGNWSYAKQRDFSFHGGKHFIIPHLETNTT 421
                                           |.::...|||   ::.:....::|:|..|.|...
  Fly   808 RSMSEIITQWQPPLEEHRNGQILGYILRYRLFGYNNVPWSY---QNITNEAQRNFLIQELITWKD 869

  Fly   422 YLMRAASRNLAGL---SDWSPVK-----------------VFTTAAGCSWSP 453
            |:::.|:.|..|:   ::.|.:|                 :.:|||.|.|:|
  Fly   870 YIVQIAAYNNMGVGVYTEGSKIKTKEGVPEAPPTNVKVEAINSTAARCRWTP 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33543NP_001014458.3 IGc2 165..224 CDD:197706 20/58 (34%)
IG_like 256..336 CDD:214653 23/84 (27%)
IGc2 263..327 CDD:197706 19/67 (28%)
FN3 341..445 CDD:238020 31/231 (13%)
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653 9/36 (25%)
Ig 280..343 CDD:299845 6/23 (26%)
IG_like 375..450 CDD:214653 19/87 (22%)
Ig 378..447 CDD:143165 18/81 (22%)
Ig 506..587 CDD:299845 20/80 (25%)
IG_like 506..587 CDD:214653 20/80 (25%)
I-set 592..682 CDD:254352 26/98 (27%)
Ig 595..682 CDD:299845 25/95 (26%)
FN3 686..789 CDD:238020 17/104 (16%)
FN3 798..893 CDD:238020 13/97 (13%)
FN3 901..1005 CDD:238020 6/21 (29%)
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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