Sequence 1: | NP_001014458.3 | Gene: | CG33543 / 3346207 | FlyBaseID: | FBgn0053543 | Length: | 468 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001258265.1 | Gene: | Vsig10 / 304529 | RGDID: | 1565800 | Length: | 564 | Species: | Rattus norvegicus |
Alignment Length: | 337 | Identity: | 67/337 - (19%) |
---|---|---|---|
Similarity: | 100/337 - (29%) | Gaps: | 143/337 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 106 ALVFEHIALEDRGNWTCEVNGNR-----------NGNRNVNVEREFLASFELLVNQKISFGKTEQ 159
Fly 160 VQSVREGRDAMVNCFVEGMPAPEVSWLYNGEYINTVNSTKH----NRLSNGLYIRNVSQADAGEY 220
Fly 221 TCRAMRITPTFSDSDQITILLRIQHK--------------------------------------- 246
Fly 247 -PHWFFNE-------------TL---------------------------------------PVQ 258
Fly 259 YAYVGGAVNLSCDAMG-EPPPSFTWLHN---NKGIVGFNHRIFVADYGATLQLQMKNASQFGD-- 317
Fly 318 -YKCKVANPLGM 328 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG33543 | NP_001014458.3 | IGc2 | 165..224 | CDD:197706 | 16/62 (26%) |
IG_like | 256..336 | CDD:214653 | 25/80 (31%) | ||
IGc2 | 263..327 | CDD:197706 | 22/70 (31%) | ||
FN3 | 341..445 | CDD:238020 | |||
Vsig10 | NP_001258265.1 | Ig | 60..146 | CDD:299845 | 11/32 (34%) |
IG_like | 60..145 | CDD:214653 | 11/31 (35%) | ||
IG_like | 165..246 | CDD:214653 | 23/106 (22%) | ||
Ig | 175..241 | CDD:143165 | 22/91 (24%) | ||
Ig_3 | 255..318 | CDD:290638 | 4/62 (6%) | ||
IG_like | 347..429 | CDD:214653 | 24/74 (32%) | ||
Ig | 351..426 | CDD:143165 | 21/70 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12231 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |