Protein Alignment CG33543 and rig-3

DIOPT Version :10

• Sequence 1: NP_001014458.3
• Gene: CG33543 / 3346207
• FlyBaseID: FBgn0053543
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_509155.1
• Gene: rig-3 / 180958
• WormBaseID: WBGene00004370
• Length: 487
• Species: Caenorhabditis elegans
• Alignment Length: 446
• Identity: 98/446 - (21%)
• Similarity: 153/446 - (34%)
• Gaps: 106/446 - (23%)

  Fly    54 TPSITHFVNESFIIFC-----QTVQKDIDTKWRDPRGQTRE------------NTKGRVHIEKKT 101
            |.:||....:..::.|     :.:.|. |..|:...|...:            |.||..|  :||
 Worm    46 TNTITVREGKKLMVSCVFESDEQIHKS-DLLWKQANGNNIDGESNPSLFSVILNEKGSKH--RKT 107

  Fly   102 TGLLALVFEHIALEDRGNWTCEVNGNRNGNRNVNVEREFLASFELLVNQKISFGKTEQVQSVREG 166
                :|.|..:...|.|.:||  .|...|..|      |..:.:|:|...|.:...:.|:....|
 Worm   108 ----SLHFSSVHTRDTGLYTC--TGRTAGGEN------FEKTIKLVVLPAIEWNDKDTVKGALLG 160

  Fly   167 RDAMVNCFVE---------------GMPAPEVSWLYNGEYINTVNSTK--HNRLSNGLYIRNVSQ 214
            ....::|.|:               |.|..|..|...|... |::|.|  |..|:.......:.|
 Worm   161 EPITIDCGVKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEA-TIDSLKKEHAELTVSCITIEMHQ 224

  Fly   215 ADAGEYTCRAMRITPTFSDSDQITILLRIQHKPHWFFNETLPVQYAYVGGAVN---LSCDAMGEP 276
            ..:.|          .|...|:..:.:.:...|.:...|:  |||..:...|.   :.|:.....
 Worm   225 ETSKE----------EFPVVDRKDVNIEVYTLPEFETEES--VQYTVIDNHVRDAIIYCNVTHSF 277

  Fly   277 PP--SFTWLHNNKGI-VGFNHRIFV---ADYGATLQLQMKNASQFGDYKCKVANPLGMLERVIKL 335
            ||  .:|:.|.::.| :.....|||   ...||.|::...|.:..|.|||:..|........|.|
 Worm   278 PPVRHYTFYHGDEEIKMSDKFNIFVNVGVSQGAHLKIHNVNENDLGTYKCEANNIKAKSYHTIHL 342

  Fly   336 RPGPKPLGP--------RRFQLKKLYTNGFELDIQ------------TPRMSNVSDEMQIYGYRV 380
            |....|..|        |...:.|:.:...:.|:.            |...|.||||
 Worm   343 REANAPAEPKVTLIEDKRHSIIWKVESIDRDPDLPMTAVEIRHLRAGTAEASGVSDE-------- 399

  Fly   381 AYMSDTEFKFSAGNWSYAKQRDFSFHGGKHFIIPHLETNTTYLMRAASRNLAGLSD 436
             .:||..:|    :.|...||:....|  .:.|..|.....|:.|....|.||..|
 Worm   400 -DISDAYWK----SHSIFMQRNIKDDG--IYEINGLRHGHEYVWRFRQINEAGFGD 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG33543	NP_001014458.3	Ig	<71..>123	CDD:472250	15/63 (24%)
		Ig strand E	105..109	CDD:409353	1/3 (33%)
		Ig strand F	119..123	CDD:409353	1/3 (33%)
		Ig	153..239	CDD:472250	18/102 (18%)
		Ig strand B	169..173	CDD:409353	0/3 (0%)
		Ig strand C	182..186	CDD:409353	1/3 (33%)
		Ig strand E	205..209	CDD:409353	0/3 (0%)
		Ig strand F	219..224	CDD:409353	1/4 (25%)
		Ig strand G	232..235	CDD:409353	0/2 (0%)
		IG_like	256..336	CDD:214653	23/88 (26%)
		Ig strand B	266..270	CDD:409353	1/6 (17%)
		Ig strand C	279..283	CDD:409353	1/3 (33%)
		Ig strand E	302..309	CDD:409353	3/6 (50%)
		Ig strand F	317..322	CDD:409353	3/4 (75%)
		FN3	341..445	CDD:238020	26/116 (22%)
rig-3	NP_509155.1	IG_like	48..142	CDD:214653	24/108 (22%)
		Ig	267..331	CDD:409353	17/63 (27%)
		Ig strand B	267..271	CDD:409353	0/3 (0%)
		Ig strand C	282..286	CDD:409353	1/3 (33%)
		Ig strand E	307..314	CDD:409353	3/6 (50%)
		Ig strand F	324..329	CDD:409353	3/4 (75%)