DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33543 and igcm-2

DIOPT Version :9

Sequence 1:NP_001014458.3 Gene:CG33543 / 3346207 FlyBaseID:FBgn0053543 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001362087.1 Gene:igcm-2 / 180913 WormBaseID:WBGene00020130 Length:802 Species:Caenorhabditis elegans


Alignment Length:423 Identity:100/423 - (23%)
Similarity:157/423 - (37%) Gaps:104/423 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GTGGAPPDRPPTPPLSLQPSTPSITHFVNESFIIFCQTVQKDIDTKWRDPRGQTRENTKGRVHIE 98
            |..|||...|           .||:.|..|||.:..:...:.|.:.:...:|......:||:   
 Worm    25 GKAGAPITLP-----------CSISLFNEESFSLDWRKDGQLILSAFGQEQGHVTPTLQGRL--- 75

  Fly    99 KKTTGLLALVFEHIALEDRGNWTCEVNGNRNGNRNVNVEREFLASFELLVNQK---ISFGKTEQV 160
             ...|.|.:....:...|.|.:.|.|  .:...:....|:..  |.:|:||..   ||..|...:
 Worm    76 -ARDGFLGITIHSVTDGDAGVYQCIV--TKFSKQPTRPEKGL--SAKLVVNVPPVIISPSKNAII 135

  Fly   161 QSVREGRDAMVNCFVEGMPAPEVSWLYNGEYINTVNSTKHNRLSNGLYIRNVSQADAGEYTCRAM 225
            .. :.|.|.:..|..||.|:||::|..|.:.|:|         |..|.:.|:.:.|.|.|||.|:
 Worm   136 HK-KVGADLIFECKAEGAPSPEITWSRNEQIIST---------SPVLTLSNLEEGDKGLYTCLAV 190

  Fly   226 RITPTFSDSDQI-----TILLRIQHKPHWFFNETLPVQYAYVGGA-VNLSCDAMGEPPP-SFTWL 283
            .|....:.|..:     |||            :.:|:....:.|: |...|.|..:... |::||
 Worm   191 NIEGNSTSSIDVRFTKATIL------------DLIPLNKTVIEGSNVFWHCHANAQATAISYSWL 243

  Fly   284 HNNKGI----VGFNHRIFVADYGATLQLQMKNASQFGDYKCKVANPLG---MLERVIKLRPGPKP 341
            ...|.|    :|....|...|    |.||....|..|.|.|:..|..|   .....:.:...|:|
 Worm   244 FEKKPIKTTSLGLRSNIRSGD----LSLQDVRKSDSGWYTCEAKNSAGETTSSTAYLHVFYPPEP 304

  Fly   342 LGPRRFQLKKLYTNGFELDIQT---PRMSNVSDEMQIYGYRVAYMSDTEFKFSA-GNW------- 395
            |...:             .:||   .|.:.||.::      :|..:.|.:.:|. |::       
 Worm   305 LSSHQ-------------PVQTVASGRNTTVSCDV------IANPTPTSYTWSKNGHYLPTQASS 350

  Fly   396 ----SYAKQRDFSFHG-------GKHFII-PHL 416
                ||||..|...:|       ||..|: .||
 Worm   351 HIIISYAKPGDGGIYGCQADNIAGKGSIVETHL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33543NP_001014458.3 IGc2 165..224 CDD:197706 20/58 (34%)
IG_like 256..336 CDD:214653 22/88 (25%)
IGc2 263..327 CDD:197706 20/69 (29%)
FN3 341..445 CDD:238020 22/99 (22%)
igcm-2NP_001362087.1 IG_like 23..101 CDD:214653 21/92 (23%)
Ig 124..200 CDD:386229 25/85 (29%)
IG_like 214..298 CDD:214653 22/87 (25%)
Ig_3 309..371 CDD:372822 15/80 (19%)
Ig 389..467 CDD:386229
FN3 476..548 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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