DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33543 and Ncam2

DIOPT Version :9

Sequence 1:NP_001014458.3 Gene:CG33543 / 3346207 FlyBaseID:FBgn0053543 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001106679.1 Gene:Ncam2 / 17968 MGIID:97282 Length:837 Species:Mus musculus


Alignment Length:576 Identity:117/576 - (20%)
Similarity:196/576 - (34%) Gaps:212/576 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VNESFIIFCQTVQKDIDTKWRDPRGQTRENTKGRVHIEKKTTGLLA-LVFEHIALEDRGNWTCEV 124
            |.||....|..:.:.....|.:|:|:...:|: ||.::|:  |:.: |...:..:||.|.:.|:.
Mouse    34 VGESKFFTCTAIGEPESIDWYNPQGEKIISTQ-RVMLQKE--GVRSRLTIYNANIEDAGIYRCQA 95

  Fly   125 NGNRNGNRNVNVEREFLASFELLVNQKISFGKTEQVQSVREGRDAMVNCFVEGMPAPEVSWLYNG 189
            ...:...:...|..|        :.||::|.:....|..::|.||.|.|.|...|||.|||||:.
Mouse    96 TDAKGQTQEATVVLE--------IYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHN 152

  Fly   190 EYINTVNSTKHNRL-SNGLYIRNVSQADAGEYTCRAMRITPTFSDSDQITILLRIQ---HKPHWF 250
            |.:.|:...:...| :|.|.|.|::::|.|.|.|..........|...|.:::.:.   ..|...
Mouse   153 EEVTTIPDNRFAVLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAIMMPQKS 217

  Fly   251 FNETLPVQYAYVGGAVNLSCDAMGEPPPSFTWLHNNKGIVGFNHRIFVADYGATLQLQMKNA--S 313
            ||.|     |..|..:.|:|.|.|.|.|:.:|..|.| ::..|.:..:.  |:..:|.::|.  .
Mouse   218 FNAT-----AERGEEMTLTCKASGSPDPTISWFRNGK-LIEENEKYILK--GSNTELTVRNIINK 274

  Fly   314 QFGDYKCKVANPLG-----------MLERVIKLR-------------------PGPKPLGPR--- 345
            ..|.|.||..|..|           :...:::|:                   |.|:....|   
Mouse   275 DGGSYVCKATNKAGEDQKQAFLQVFVQPHILQLKNETTSENGHVTLVCEAEGEPVPEITWKRAID 339

  Fly   346 -------------RFQLK-------------KLYTNG----------------FELDIQ-TPRMS 367
                         |.::|             ||..:|                ..|||: .|:. 
Mouse   340 GVMFSEGDKSPDGRIEVKGQHGRSSLHIRDVKLSDSGRYDCEAASRIGGHQRSMHLDIEYAPKF- 403

  Fly   368 NVSDEMQIYGY-----------------------------------------------RVAYMSD 385
             ||::...|.:                                               .:|..||
Mouse   404 -VSNQTMYYSWEGNPINISCDVTANPPASIHWRREKLLLPAKNTTHLKTHSVGRKMILEIAPTSD 467

  Fly   386 TEF---KFSAGNWSYAKQRDF--------------------------SF-----HGG---KHF-- 411
            .:|   ..:|.|....:.:::                          ||     |||   .|:  
Mouse   468 NDFGRYNCTATNRIGTRFQEYILELADVPSSPHGVKIIELSQTTAKISFNKPESHGGVPIHHYQV 532

  Fly   412 ----------------------IIPHLETNTTYLMRAASRNLAGLSDWSPVKVFTT 445
                                  ::..||.||||.:|.|:.|..|..|:|.:::|.|
Mouse   533 DVKEVASETWKIVRSHGVQTMVVLSSLEPNTTYEIRVAAVNGKGQGDYSKIEIFQT 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33543NP_001014458.3 IGc2 165..224 CDD:197706 25/59 (42%)
IG_like 256..336 CDD:214653 21/92 (23%)
IGc2 263..327 CDD:197706 19/65 (29%)
FN3 341..445 CDD:238020 38/257 (15%)
Ncam2NP_001106679.1 Ig1_NCAM-2 21..112 CDD:143274 19/88 (22%)
I-set 22..111 CDD:254352 19/87 (22%)
I-set 117..193 CDD:254352 27/75 (36%)
IGc2 128..189 CDD:197706 25/60 (42%)
Ig 208..301 CDD:299845 25/100 (25%)
I-set 215..298 CDD:254352 24/90 (27%)
Ig 300..397 CDD:299845 10/96 (10%)
IG_like 308..395 CDD:214653 8/86 (9%)
IG_like 413..491 CDD:214653 6/77 (8%)
IGc2 414..482 CDD:197706 6/67 (9%)
FN3 496..588 CDD:238020 19/91 (21%)
fn3 594..678 CDD:278470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 764..810
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11169
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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