DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33543 and ncam2

DIOPT Version :10

Sequence 1:NP_001014458.3 Gene:CG33543 / 3346207 FlyBaseID:FBgn0053543 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_571905.1 Gene:ncam2 / 114441 ZFINID:ZDB-GENE-010822-1 Length:795 Species:Danio rerio


Alignment Length:424 Identity:111/424 - (26%)
Similarity:177/424 - (41%) Gaps:68/424 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PPLSLQPSTPSITHFVNESFIIFCQTV-QKDIDTKWRDPRGQTRENTKGRVHIEKKTTGLLALVF 109
            |.:|:...:.:.|....||....|:.. ..:.|..|.....|.:|:.: .|...:.||    |..
Zfish   207 PVVSVPQQSFNATADYGESVTFTCRAYGSPEPDVTWHRKGVQLQESER-YVMRARGTT----LTV 266

  Fly   110 EHIALEDRGNWTCEVNGNRNGNRNVNVERE-FLASFELLVNQKISFGKTEQVQSVREGRDAMVNC 173
            .:|..:|.|::||     |..|:...||.| ||..|   |...|:  |...|.:| ||..||::|
Zfish   267 RNIQQDDGGSYTC-----RASNKAGEVEHELFLKVF---VQPHIT--KLRNVTAV-EGSAAMISC 320

  Fly   174 FVEGMPAPEVSW--LYNGEYINTVNSTKHNRLS-NGLY------IRNVSQADAGEYTCRAM-RIT 228
            ..||.|.||:||  ..:|...:..:.:...|:. .|.|      |..|..:|.|.:.|.|: || 
Zfish   321 KAEGEPLPEISWRRASDGHSFSDGDKSPDGRVEVRGRYGESMLTIVVVKLSDWGRFDCEALSRI- 384

  Fly   229 PTFSDSDQITILLRIQHKPHWFFNETLPVQYAYVGGAVNLSCDAMGEPPPSFTWLHNNKGI---- 289
                ...|.::.|.|::.|.:..|.|  :.:::.|..||:|||.|..||.:..|......|    
Zfish   385 ----GGHQKSMFLDIEYAPKFQANHT--IFFSWEGNPVNISCDVMSNPPATMLWRREKLTIPSEG 443

  Fly   290 VGFNHRIFVADYGATLQLQMKNASQFGDYKCKVANPLGMLERVIKLRPGPKPLGPRRFQLKKLYT 354
            .| |.|::.|...:.|::...:...||.|.|...|.:||..:...|.....|..|...:|..:  
Zfish   444 AG-NMRVYTAPGRSLLEVTPMSDRDFGRYNCTARNNIGMRFQEFILAQADVPSNPYSVRLSSV-- 505

  Fly   355 NGFELDIQTPRMSNVS-------DEMQIYGYRVAYMSDTEFKFSAGNWSYAKQRDFSFHGGKHFI 412
                    ..|::.|:       ..:.|..|.|.|..     .|:.:|     :|....|.:..:
Zfish   506 --------AQRVATVTFTKPDSHGGVPISHYLVKYKD-----ISSQDW-----KDVKSLGTQTIV 552

  Fly   413 -IPHLETNTTYLMRAASRNLAGLSDWSPVKVFTT 445
             :.:||.||||.:|.::.|..|..::|..:.|.|
Zfish   553 LLTNLEPNTTYEVRVSAVNGKGQGEFSHTESFQT 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33543NP_001014458.3 Ig <71..>123 CDD:472250 12/52 (23%)
Ig strand E 105..109 CDD:409353 1/3 (33%)
Ig strand F 119..123 CDD:409353 1/3 (33%)
Ig 153..239 CDD:472250 28/95 (29%)
Ig strand B 169..173 CDD:409353 2/3 (67%)
Ig strand C 182..186 CDD:409353 3/5 (60%)
Ig strand E 205..209 CDD:409353 2/9 (22%)
Ig strand F 219..224 CDD:409353 1/4 (25%)
Ig strand G 232..235 CDD:409353 0/2 (0%)
IG_like 256..336 CDD:214653 23/83 (28%)
Ig strand B 266..270 CDD:409353 2/3 (67%)
Ig strand C 279..283 CDD:409353 0/3 (0%)
Ig strand E 302..309 CDD:409353 1/6 (17%)
Ig strand F 317..322 CDD:409353 2/4 (50%)
FN3 341..445 CDD:238020 24/111 (22%)
ncam2NP_571905.1 IgI_1_NCAM-2 20..112 CDD:409452
Ig strand A 20..25 CDD:409452
Ig strand A' 28..32 CDD:409452
Ig strand B 34..44 CDD:409452
Ig strand C 48..54 CDD:409452
Ig strand C' 57..59 CDD:409452
Ig strand D 65..71 CDD:409452
Ig strand E 73..81 CDD:409452
Ig strand F 88..95 CDD:409452
Ig strand G 100..111 CDD:409452
Ig 131..194 CDD:409353
Ig strand B 131..135 CDD:409353
Ig strand C 144..148 CDD:409353
Ig strand F 181..186 CDD:409353
IgI_1_MuSK 213..296 CDD:409562 24/92 (26%)
Ig strand A' 215..220 CDD:409562 0/4 (0%)
Ig strand B 226..233 CDD:409562 1/6 (17%)
Ig strand C 239..244 CDD:409562 2/4 (50%)
Ig strand C' 246..248 CDD:409562 0/1 (0%)
Ig strand D 255..258 CDD:409562 1/2 (50%)
Ig strand E 262..268 CDD:409562 3/9 (33%)
Ig strand F 275..282 CDD:409562 4/11 (36%)
Ig strand G 288..296 CDD:409562 5/7 (71%)
Ig 298..395 CDD:472250 31/104 (30%)
Ig strand B 316..320 CDD:409353 2/3 (67%)
Ig strand C 329..333 CDD:409353 2/3 (67%)
Ig strand E 361..365 CDD:409353 0/3 (0%)
Ig strand F 375..380 CDD:409353 1/4 (25%)
Ig strand G 388..391 CDD:409353 1/2 (50%)
IG_like 411..488 CDD:214653 23/77 (30%)
Ig strand B 416..420 CDD:409353 2/3 (67%)
Ig strand C 429..433 CDD:409353 0/3 (0%)
Ig strand E 456..460 CDD:409353 1/3 (33%)
Ig strand F 470..475 CDD:409353 2/4 (50%)
FN3 <487..>675 CDD:442628 26/120 (22%)
FN3 494..586 CDD:238020 24/111 (22%)
Blue background indicates that the domain is not in the aligned region.

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