DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-II and SIGLEC6

DIOPT Version :9

Sequence 1:NP_001014485.3 Gene:side-II / 3346206 FlyBaseID:FBgn0259213 Length:1064 Species:Drosophila melanogaster
Sequence 2:XP_011525835.1 Gene:SIGLEC6 / 946 HGNCID:10875 Length:464 Species:Homo sapiens


Alignment Length:345 Identity:80/345 - (23%)
Similarity:135/345 - (39%) Gaps:82/345 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 EGKSVSLPC--PITEPLDNVYMVLWFRDNAGIPLYSFDVRDKESREQPRHWSAPEVFGSRAKFHF 123
            ||..|.:||  |.|.|........||.:.|.:|:.:.| .|:|.:|:           :|.:||.
Human    43 EGLCVLVPCRLPTTLPASYYGYGYWFLEGADVPVATND-PDEEVQEE-----------TRGRFHL 95

  Fly   124 DSQP----ATLEI---KRHDQGIYRCRVD---FRTSQTQSFRFNLSVIILPEQPIIMDRWGRQLN 178
            ...|    .:|.|   :|.|...|..|:.   .:...|.| :.::.|:.|..:|.|      .:.
Human    96 LWDPRRKNCSLSIRDARRRDNAAYFFRLKSKWMKYGYTSS-KLSVRVMALTHRPNI------SIP 153

  Fly   179 GTQLGPKQEGDDIVITCRV----VGGRPQPQVRWLVNGLLVDNQNEHNSGD-VIENRLLWPSVQR 238
            ||    .:.|....:||.|    ..|.| |...|:       :....:.|. ..::.:|..:.:.
Human   154 GT----LESGHPSNLTCSVPWVCEQGTP-PIFSWM-------SAAPTSLGPRTTQSSVLTITPRP 206

  Fly   239 NDLNSVFTCQALNTQLDKPKEKSFILD----MHLKPL-------------------VVKILEPPS 280
            .|.::..|||..........|::..|:    :...||                   ..|||:..|
Human   207 QDHSTNLTCQVTFPGAGVTMERTIQLNVSWMLRRPPLSTPDAPQKVAISIFQGNSAAFKILQNTS 271

  Fly   281 SM--IADRRYEVSCESSGSRPNAIITWYKGKRQLRRTKDDISKNSTRSELSFVPTTDDDGKSITC 343
            |:  :..:...:.|::.|: |.|.::|::|...|..|  .|| |:...||..|.:.::.  ..||
Human   272 SLPVLEGQALRLLCDADGN-PPAHLSWFQGFPALNAT--PIS-NTGVLELPQVGSAEEG--DFTC 330

  Fly   344 RAENPNVN---GLYLETMWK 360
            ||::|..:   .|.|...||
Human   331 RAQHPLGSLQISLSLFVHWK 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IINP_001014485.3 IG_like 55..160 CDD:214653 28/110 (25%)
Ig 57..160 CDD:299845 28/110 (25%)
Ig 188..251 CDD:299845 14/67 (21%)
Ig 289..363 CDD:299845 23/75 (31%)
IG_like 289..351 CDD:214653 19/61 (31%)
Ig_2 376..460 CDD:290606
IG_like 383..454 CDD:214653
Ig 470..548 CDD:299845
IG_like 481..557 CDD:214653
SIGLEC6XP_011525835.1 Ig 31..141 CDD:299845 28/110 (25%)
IG_like 36..141 CDD:214653 28/110 (25%)
Ig_3 147..218 CDD:290638 18/88 (20%)
I-set 265..347 CDD:254352 26/87 (30%)
Ig 277..347 CDD:299845 21/75 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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