DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-II and CNTN2

DIOPT Version :10

Sequence 1:NP_001400995.1 Gene:side-II / 3346206 FlyBaseID:FBgn0259213 Length:1067 Species:Drosophila melanogaster
Sequence 2:XP_047285058.1 Gene:CNTN2 / 6900 HGNCID:2172 Length:1187 Species:Homo sapiens


Alignment Length:1103 Identity:216/1103 - (19%)
Similarity:355/1103 - (32%) Gaps:371/1103 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 AVEGKSVSLPC-----PITEPLDNVYMVLWFRDNAGIPLYSFDVRDKESREQPRHWSAPEVFGSR 118
            |:.|:.|:|.|     |:..       :.|              |..:....|: |:..|     
Human   251 ALVGQQVTLECFAFGNPVPR-------IKW--------------RKVDGSLSPQ-WTTAE----- 288

  Fly   119 AKFHFDSQPATLEIKDIKRHDQGIYRCRVD-FRTSQTQSFRFNLSVIILPEQPIIMDRWGRQLNG 182
                     .||:|..:...|:|.|.|..: .:...|...|     ||:..||    .|.:.::.
Human   289 ---------PTLQIPSVSFEDEGTYECEAENSKGRDTVQGR-----IIVQAQP----EWLKVISD 335

  Fly   183 TQLGPKQEGDDIVITCRVVGGRPQPQVRWLVNG--LLVDNQNEHNSGDV------IENRLLWPSV 239
            |:   ...|.::...| ...|:|:|.||||.||  |...|:.|..:||:      :|:..::..|
Human   336 TE---ADIGSNLRWGC-AAAGKPRPTVRWLRNGEPLASQNRVEVLAGDLRFSKLSLEDSGMYQCV 396

  Fly   240 QRNDLNSVFTCQALNTQLDKPKEKSFILDMHLKPLVVKILEPPSSMIADRRYE--VSCESSGSRP 302
            ..|...:::....|..|...|       |..|.|  |:.|.|     |.|..|  :.|:...: |
Human   397 AENKHGTIYASAELAVQALAP-------DFRLNP--VRRLIP-----AARGGEILIPCQPRAA-P 446

  Fly   303 NAIITWYKGKRQLRRTKDDISKNSTRSELSFVP---------TTDDDGKSITCRAEN----PNVN 354
            .|::.|.||        .:|..||:|  ::..|         :..|:|| .||.|||    .|..
Human   447 KAVVLWSKG--------TEILVNSSR--VTVTPDGTLIIRNISRSDEGK-YTCFAENFMGKANST 500

  Fly   355 GLYLETMWKLNVVYPPLVTLRLGSTLTPDDIKEGDDVYFECHVQSNPQW-RKLLWLHNGIHLE-- 416
            |:       |:|.....:||...|.    ||..||::..:||...:|.. ....|..:...::  
Human   501 GI-------LSVRDATKITLAPSSA----DINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFD 554

  Fly   417 ----HNTSARVIRSNQSLVLQKITKHYAGNYACSA--------------------------INDE 451
                |.....|..:...|.:......:.|.|.|.|                          :.|.
Human   555 KPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDI 619

  Fly   452 GETV---------SNQLPLRVKYTPMCKHADRVILIGASKDETVEVVCEIQADPPPRTFRWKFNN 507
            |:|.         .|..|: .|||                         :||..|| ..:||   
Human   620 GDTTIQLSWSRGFDNHSPI-AKYT-------------------------LQARTPP-AGKWK--- 654

  Fly   508 SGETLDVGSERFSVNG---SRSILKYTPVTDQDYGTLSCWASNEVGTQQHPC-------LFQVVL 562
                 .|.:...::.|   :..:|..||..|.::..:   |||.:||.: |.       ..:...
Human   655 -----QVRTNPANIEGNAETAQVLGLTPWMDYEFRVI---ASNILGTGE-PSGPSSKIRTREAAP 710

  Fly   563 AALPNAVSNC------TVFNRTELSVDIQCIPGYDGGLPQIFVLEMFSTRTGITRFNL-----SN 616
            :..|:.:|..      .:.|.|.:|.:.|...|:.      ::|..  .|.|.|.:..     ::
Human   711 SVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFG------YLLSF--RRQGSTHWQTARVPGAD 767

  Fly   617 AEEALFSLENLDTLTSMMVQENNSLRLRIYSYNQKGRSAAYLLTDFIIGSTAYKTDDDVTLTLSP 681
            |:..::|.|::...|...|        :|.|||::|.....|.      :..|..:::.  .::|
Human   768 AQYFVYSNESVRPYTPFEV--------KIRSYNRRGDGPESLT------ALVYSAEEEP--RVAP 816

  Fly   682 VIVGSVLTIIIIGVAIAIRIFVVTFVHNLRRNRHHGSKATAAGVTAQPSDVFKGGNLEKPRWQHT 746
                                                :|..|.||::...:|         .|:..
Human   817 ------------------------------------TKVWAKGVSSSEMNV---------TWEPV 836

  Fly   747 DIKTKSSEDLVEDERDPDVIPSQY-VGGSSAGSSGSNASNV---GSTTAGTATGSSTSTAVVANA 807
                         ::|.:.|...| :....||...:.|..|   |..|:...:|...:|..  :.
Human   837 -------------QQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKY--HV 886

  Fly   808 NAAASAMAGPGGATSSASAT---------DGHQFASGTAAAGGGASKWSP-----NGNVTT--TM 856
            ...|...||.|.|:.||:||         .|:  .|.|.::...:.||.|     |.:..|  .|
Human   887 TVRAYNRAGTGPASPSANATTMKPPPRRPPGN--ISWTFSSSSLSIKWDPVVPFRNESAVTGYKM 949

  Fly   857 LTGDAVNATVTYNQINAQRAQL---------LAAVAAVGGGCSSTVISPSSSILGGLGKPLGMGM 912
            |..:.::.|.|.:.......::         |..:...|.|.............||...||.:..
Human   950 LYQNDLHLTPTLHLTGKNWIEIPVPEDIGHALVQIRTTGPGGDGIPAEVHIVRNGGAAPPLPLSP 1014

  Fly   913 G--MGLGMGVGGTVIGSPTSLSS------------TATLAAHLQPAHSSGVGTLP---------- 953
            .  ......:.|:....||.:|:            .::|.....|.......|.|          
Human  1015 REIQDPPRYLRGSFPPRPTPISTRKGKWKAGRNQVQSSLRTASPPPFYPAPRTSPRAREGRRVQG 1079

  Fly   954 -----PGLGSGGGYILNAYASGRLHHPPGGGVPGGATHTATLNRHHHQQQQLHHHPHHQQPHH 1011
                 |.:.:|    |.:.....|..||...:||     ..|..|.|...: |..|....|.|
Human  1080 EAEDQPAIANG----LQSTVGVGLRRPPSRPLPG-----LQLALHKHDGGE-HGSPPSTTPWH 1132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IINP_001400995.1 V-set 55..163 CDD:462230 20/109 (18%)
Ig_3 190..254 CDD:464046 19/71 (27%)
Ig <292..366 CDD:472250 23/88 (26%)
Ig strand B 292..295 CDD:409418 1/4 (25%)
Ig strand C 305..309 CDD:409418 0/3 (0%)
Ig strand E 329..333 CDD:409418 0/3 (0%)
Ig strand F 343..348 CDD:409418 2/4 (50%)
Ig strand G 359..362 CDD:409418 0/2 (0%)
Ig 382..457 CDD:472250 18/116 (16%)
Ig strand B 391..395 CDD:409405 0/3 (0%)
Ig strand C 405..409 CDD:409405 0/3 (0%)
Ig strand E 428..432 CDD:409405 1/3 (33%)
Ig strand F 442..447 CDD:409405 2/4 (50%)
Ig 486..554 CDD:409353 17/70 (24%)
Ig strand B 486..490 CDD:409353 0/3 (0%)
Ig strand C 500..504 CDD:409353 0/3 (0%)
Ig strand E 526..530 CDD:409353 1/3 (33%)
Ig strand F 540..545 CDD:409353 0/4 (0%)
CNTN2XP_047285058.1 IgI_1_Contactin-2 35..131 CDD:409437
Ig strand A 38..42 CDD:409437
Ig strand A' 45..50 CDD:409437
Ig strand B 56..64 CDD:409437
Ig strand C 69..75 CDD:409437
Ig strand C' 77..80 CDD:409437
Ig strand D 87..91 CDD:409437
Ig strand E 93..99 CDD:409437
Ig strand F 106..115 CDD:409437
Ig strand G 118..131 CDD:409437
Ig2_Contactin-2-like 139..228 CDD:409392
Ig strand A 141..146 CDD:409392
Ig strand B 150..156 CDD:409392
Ig strand C 164..170 CDD:409392
Ig strand C' 175..177 CDD:409392
Ig strand D 182..187 CDD:409392
Ig strand E 190..194 CDD:409392
Ig strand F 204..212 CDD:409392
Ig strand G 216..228 CDD:409392
Ig 239..324 CDD:472250 22/113 (19%)
Ig strand B 257..261 CDD:409353 2/3 (67%)
Ig strand C 270..274 CDD:409353 1/24 (4%)
Ig strand E 289..293 CDD:409353 2/3 (67%)
Ig strand F 303..308 CDD:409353 2/4 (50%)
Ig strand G 316..319 CDD:409353 1/2 (50%)
Ig4_Contactin-2-like 328..412 CDD:143205 22/87 (25%)
Ig strand A 328..331 CDD:143205 1/2 (50%)
Ig strand A' 335..339 CDD:143205 1/6 (17%)
Ig strand B 343..351 CDD:143205 1/8 (13%)
Ig strand C 357..362 CDD:143205 3/4 (75%)
Ig strand C' 364..367 CDD:143205 1/2 (50%)
Ig strand D 372..376 CDD:143205 1/3 (33%)
Ig strand E 378..383 CDD:143205 2/4 (50%)
Ig strand F 392..399 CDD:143205 1/6 (17%)
Ig strand G 403..412 CDD:143205 1/8 (13%)
Ig5_Contactin 417..505 CDD:409358 32/120 (27%)
Ig strand A 417..422 CDD:409358 2/11 (18%)
Ig strand A' 425..430 CDD:409358 2/9 (22%)
Ig strand B 434..441 CDD:409358 1/6 (17%)
Ig strand C 449..453 CDD:409358 0/3 (0%)
Ig strand D 467..470 CDD:409358 0/2 (0%)
Ig strand E 471..476 CDD:409358 0/4 (0%)
Ig strand F 484..492 CDD:409358 5/8 (63%)
Ig strand G 498..505 CDD:409358 3/13 (23%)
Ig6_Contactin-2 507..603 CDD:409440 18/99 (18%)
Ig strand A 507..513 CDD:409440 0/5 (0%)
Ig strand A' 516..521 CDD:409440 2/8 (25%)
Ig strand B 524..532 CDD:409440 2/7 (29%)
Ig strand C 541..545 CDD:409440 0/3 (0%)
Ig strand D 566..569 CDD:409440 0/2 (0%)
Ig strand E 570..574 CDD:409440 1/3 (33%)
Ig strand F 583..590 CDD:409440 3/6 (50%)
Ig strand G 597..601 CDD:409440 0/3 (0%)
FN3 618..705 CDD:238020 26/125 (21%)
FN3 726..800 CDD:238020 19/89 (21%)
FN3 815..907 CDD:238020 26/151 (17%)
PHA03247 <989..1184 CDD:223021 28/154 (18%)
Blue background indicates that the domain is not in the aligned region.

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