DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-II and side-VI

DIOPT Version :9

Sequence 1:NP_001014485.3 Gene:side-II / 3346206 FlyBaseID:FBgn0259213 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_001036705.1 Gene:side-VI / 4379854 FlyBaseID:FBgn0083950 Length:1087 Species:Drosophila melanogaster


Alignment Length:1150 Identity:364/1150 - (31%)
Similarity:552/1150 - (48%) Gaps:204/1150 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GGISSKDSHVKT-------KDIDAVEGKSVSLPCPI--TEPLDNVYMVLWFRDNAGIPLYSFDVR 98
            |.|:..:||...       :.:..:...|..:.|.:  ::..|.|.:|:|:::|  :|:||:|.|
  Fly    14 GAITHANSHEHADGFKPDGEILRVLVNSSAQIKCDVGSSQADDKVLLVVWYKNN--LPIYSYDTR 76

  Fly    99 DKESREQPRHWSAPEVFGSRAKFHFDSQPATL---EIKRHDQGIYRCRVDFRTSQTQSFRFNLSV 160
            ...: ..|.||...||...||.|....:||.|   .:|..|.|.:||||||:.|||::...||.|
  Fly    77 GAHA-GTPSHWRDEEVLEDRAVFRTHKEPAELIINPVKEKDAGNFRCRVDFKLSQTRNSNVNLEV 140

  Fly   161 IILPEQPIIMDRWGRQLN-GTQLGPKQEGDDIVITCRVVGGRPQPQVRWLVNGLLVDNQNEHNSG 224
            ::.|.||||.:.  |:|. .::.||.:||..:.:||.|.||.|.|.|.||:||.|.::..::...
  Fly   141 VVPPTQPIIFNE--RRLRIDSRAGPYEEGGSLEVTCVVYGGSPPPTVIWLMNGQLQNSVVDYTYD 203

  Fly   225 DVIENRLLWPSVQRNDLNSVFTCQALNTQLDKPKEKSFILDMHLKPLVVKILEPPSSMIADRRYE 289
            ..|.::|:..::.|...::|:||||.|.. .|....:..:|::|:||:|:|......|.|||:||
  Fly   204 GAINSKLVVRNLSRIHQHAVYTCQASNFH-KKYVATNITIDLYLRPLLVEISFNNQPMSADRKYE 267

  Fly   290 VSCESSGSRPNAIITWYKGKRQLRRTKDDISK--NSTRSELSFVPTTDDDGKSITCRAENPNVNG 352
            :.|::.||||.|.|||:.|..:|......:|:  |.:.|.||..||.:|.||:::|||.|..|..
  Fly   268 IECQAIGSRPPAKITWWMGNLELHGHSQKVSEDGNVSTSVLSITPTREDHGKALSCRATNELVRN 332

  Fly   353 LYLETMWKLNVVYPPLVTLRLGSTLTPDDIKEGDDVYFECHVQSNPQWRKLLWLHNGIHLEHNTS 417
            ...||..||||.:.|.:.|.|||.|.|:||:|||||||||.|.:||...|::|.||...::||..
  Fly   333 GIRETAMKLNVFFIPTLQLDLGSNLNPEDIEEGDDVYFECKVHANPAAYKVVWKHNHQIIQHNQR 397

  Fly   418 ARVIRSNQSLVLQKITKHYAGNYACSAINDEGETVSNQLPLRVKYTPMCKHADRVILIGASKDET 482
            |.||.|:..|.||.:|:|.||||.|:|.|.||:..||.:.|:|.|.|:|: .|:..:.|.:::|.
  Fly   398 AGVIVSSGDLALQGVTRHQAGNYTCTASNVEGDGDSNVVELKVMYKPICR-PDQKKIYGVARNEA 461

  Fly   483 VEVVCEIQADPPPRTFRWKFNNSGETLDVGSERFSVNGSR-SILKYTPVTDQDYGTLSCWASNEV 546
            .|:|||:.|.|||..|:|.|||:.||.|:....|..:.:: |.|.||||.:.|:||:.|||.|.|
  Fly   462 AEIVCEVDAFPPPENFKWSFNNTAETFDMPQSGFRPHSAQGSTLTYTPVKEMDFGTIMCWADNNV 526

  Fly   547 GTQQHPCLFQVVLAALPNAVSNCTVFNRTELSVDIQCIPGYDGGLPQIFVLEMFSTRTGITRFNL 611
            |.|:.||:|.::.|..|.|.:||||.|:|..|:::.||.|:|||:.|.|::|:|...:|..:.|:
  Fly   527 GQQKEPCVFHLIAAGKPEAPTNCTVVNQTSDSLEVYCIEGFDGGMRQWFLMEIFDQHSGQLQANI 591

  Fly   612 SNAEEALFSLENLDTLTSMMVQENNSLRLRIYSYNQKGRSAAYLLTDF--------IIGSTAYK- 667
            | |:.|..|:..||.        ....|:.:|:.|.:|||.|..|..:        .:..|:|| 
  Fly   592 S-AKFAALSVTGLDA--------GRLFRIYVYAVNGRGRSDAIALDGYTLKAAEKQTVALTSYKG 647

  Fly   668 ---TDDDVTLTLSPVI-----VGSVLTIIIIGVAIAIRIFVVTFVHNLRRNRHHGSKATAAGVTA 724
               :.|:..||  |::     ||.::.|:.||:.....:       .||.::|...:.     ..
  Fly   648 SAQSPDNFELT--PILSIGIFVGILVAIVCIGIGTIAAL-------KLRSHKHQQQQK-----FV 698

  Fly   725 QPSDVF-KGGNLEKPRWQHTDIKTK-----SSEDLVEDERDPDVIPSQYVGG-----SSAGSSGS 778
            .|:..| :.|||:        ||.|     |..:.:.||::|||:|...|.|     |:..:...
  Fly   699 HPNAKFSRPGNLQ--------IKDKISLPLSHSEEMYDEKNPDVVPYNEVDGEYKQKSATQTPSG 755

  Fly   779 NASNVGSTTAGTATGSSTSTAVVANANAAASAMAGPGGATSSASATDGHQFA--------SGTAA 835
            :.|...........||::.|.:| .||:|.|       .|..:|..|...:|        ||:: 
  Fly   756 HLSTTSEVEISCKPGSTSGTGIV-QANSADS-------GTYQSSKDDELHYAELSLTNMPSGSS- 811

  Fly   836 AGGGASKWSPNGNVTTTMLTGDAVNATVTYNQINAQRAQLLAAVAAVGG----GCSSTVI---SP 893
              |.:.|..|.|.|        .|...|...|...|:.|:......:||    |.|...:   .|
  Fly   812 --GASKKGQPMGGV--------GVVQHVVQQQQQQQQGQVQHPHQLLGGTLPHGSSMRKLLPTIP 866

  Fly   894 SSSIL-------GGLGKP-------------------------------------LGMGMGMGLG 914
            :::.|       ||:..|                                     .|:|.|.|.|
  Fly   867 ATATLQRHKPNAGGMQHPHQHAPPPTYDYDYFEEPTIYAQIDAYKTMQVDTGVVVAGVGAGAGSG 931

  Fly   915 MGVGGTVIGSP-----TSLSSTATLAAHLQPAHSSGVGTLPPGLGSGGGYILNAYASGRLHHPPG 974
            :...|..|.||     .|..|..|:..:..|.|..|..|||.          |.:|..::    .
  Fly   932 VNGAGASISSPGSHGTPSTVSPGTVQMYTLPQHPGGYHTLPH----------NHHAQQQM----A 982

  Fly   975 GGVPGGATHTATLNRHHHQQQQLHHHP----------HHQQPHHS----GSSLLMGSAGSVMGVV 1025
            ||....|:....:.:...||||:||||          |.||....    |..|:..::..    :
  Fly   983 GGPQNSASMMQMMQQQQQQQQQMHHHPASNMPPSYQQHQQQQQQQQMAHGQMLVSSNSSG----L 1043

  Fly  1026 GSTTTATTSCNSSQDLDDNININAIKDCLMTQRVP------ESCV 1064
            .|||.|..|.:||......:..:..:: ::|.|.|      ||||
  Fly  1044 ASTTAAVASPSSSLSGLSGVGKSYSRE-IVTVRTPLMYSQQESCV 1087

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IINP_001014485.3 IG_like 55..160 CDD:214653 37/109 (34%)
Ig 57..160 CDD:299845 37/107 (35%)
Ig 188..251 CDD:299845 22/62 (35%)
Ig 289..363 CDD:299845 31/75 (41%)
IG_like 289..351 CDD:214653 26/63 (41%)
Ig_2 376..460 CDD:290606 43/83 (52%)
IG_like 383..454 CDD:214653 36/70 (51%)
Ig 470..548 CDD:299845 34/78 (44%)
IG_like 481..557 CDD:214653 37/76 (49%)
side-VINP_001036705.1 IG_like 35..140 CDD:214653 37/107 (35%)
Ig_3 157..230 CDD:290638 25/72 (35%)
IG_like 165..242 CDD:214653 25/77 (32%)
Ig 265..343 CDD:299845 32/77 (42%)
IG_like 267..343 CDD:214653 31/75 (41%)
IG_like 363..440 CDD:214653 39/76 (51%)
IGc2 364..429 CDD:197706 34/64 (53%)
IG_like 456..532 CDD:214653 34/75 (45%)
Ig_3 456..524 CDD:290638 30/67 (45%)
fn3 545..622 CDD:278470 30/85 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470096
Domainoid 1 1.000 41 1.000 Domainoid score I12487
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D139790at33208
OrthoFinder 1 1.000 - - FOG0002810
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23278
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1676
87.850

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