DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-II and side-III

DIOPT Version :9

Sequence 1:NP_001014485.3 Gene:side-II / 3346206 FlyBaseID:FBgn0259213 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_001036681.1 Gene:side-III / 4379844 FlyBaseID:FBgn0083949 Length:1689 Species:Drosophila melanogaster


Alignment Length:1127 Identity:333/1127 - (29%)
Similarity:501/1127 - (44%) Gaps:273/1127 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SGSGGISSKDSHVKTKDIDAVEGKSVSLPCPITEPL---DNVYMVLWFRDNAGIPLYSFDVRDKE 101
            ||.......|..|.|..::||.|::.||||.| ||.   |.||||||||::||.||||||||.:.
  Fly    42 SGQIDWDDDDDPVSTVAVEAVLGRTASLPCDI-EPEAKDDRVYMVLWFRESAGKPLYSFDVRGRP 105

  Fly   102 SREQPRHWSAPEVFGSRAKFHFDSQPATL---EIKRHDQGIYRCRVDFRTSQTQSFRFNLSVIIL 163
            . |:..:||....||.||.|....|||.|   .|:..|:|:|||||||:.|.|::.|.||:||:.
  Fly   106 F-EKALYWSDTNSFGPRAYFVTGQQPAKLSVDNIQLDDEGVYRCRVDFQNSPTRNHRINLTVIVP 169

  Fly   164 PEQPIIMDRWGRQLNGTQLGPKQEGDDIVITCRVVGGRPQPQVRWLVNGLLVDNQNEHNSG---- 224
            |.|.::.|..||.:.|. :||..|||:||:||.|.||||:|.|.|: ||   ....|..||    
  Fly   170 PHQILVYDASGRDVAGA-VGPLLEGDNIVLTCEVRGGRPEPTVTWM-NG---TRTLEAGSGVSMG 229

  Fly   225 -DVIENRLLWPSVQRNDLNSVFTCQALNTQLDKPKEKSFILDMHLKPLVVKILEPPSSMIADRRY 288
             .|..|||....:.|:.||:.:.|||.||:|..|.|:|..::|.|||..|.:........::.:|
  Fly   230 RHVTVNRLEVAQISRSALNNTYRCQASNTKLVAPVERSIRIEMLLKPTSVNLTNKLKVFASNTQY 294

  Fly   289 EVSCESSGSRPNAIITWYKGKRQLRRTKDDISKNSTR--SELSFVPTTDDDGKSITCRAENPNVN 351
            .::|..:||.|:..|.|.:..|..:|.....|:::.|  |.|:|.|..:|||..:.|...||.:.
  Fly   295 NLTCIVAGSVPDTEIKWTQNNRPFKRGLLSTSQSNGRVISTLTFYPQPEDDGTMLKCEGSNPRLQ 359

  Fly   352 GLYLETMWKLNVVYPPLVTLRLGSTLTPDDIKEGDDVYFECHVQSNPQWRKLLWLHNGIHLEHNT 416
            ...:|....:||:|||.|||.|||||.|||||||||||||||::|||:..:::|.|:|..:..|.
  Fly   360 NSAIEDSLMMNVIYPPQVTLSLGSTLRPDDIKEGDDVYFECHIKSNPKEHRIMWSHDGQPVTQNV 424

  Fly   417 SARVIRSNQSLVLQKITKHYAGNYACSAINDEGETVSNQLPLRVKYTPMCKHADRVILIGASKDE 481
            |..:|.|.:|||||::.:.::|.|||||.||.|||.|..:.||::|.|:|. :..:.:||||.:|
  Fly   425 SWGIIISTRSLVLQRVGRIHSGFYACSAANDRGETQSAPVNLRIRYAPVCS-SSSITVIGASLEE 488

  Fly   482 TVEVVCEIQADPPPRTFRWKFNNSGETLDVGSERFSV----------NGSRSILK---------- 526
            .|.:.|.:.:|||...|.|.|:.|||..:|.|..::.          :..|::::          
  Fly   489 DVPIPCRVNSDPPEIDFEWTFSTSGEHFEVPSGHYATIQDPTMTTTSDVRRTVVESNETHFESYV 553

  Fly   527 -------YTPVTDQDYGTLSCWASNEVGTQQHPCLFQVVLAALPNAVSNCTV------------F 572
                   |||..::|||||:|:..|.:|.|..||:||||.||.|.|:.|||:            .
  Fly   554 ETVSELIYTPKGERDYGTLACYGRNAIGKQSDPCVFQVVPAAKPGALRNCTLRPYVVTSASLNSS 618

  Fly   573 NRTELSVDIQCIP----GYDGGLPQI-FVLEMFSTRTGITRFNLSNAEEALFSLENLDTLTSMMV 632
            |:|.:..: |.:|    .::...|.: :|.|         |.|.|...         :..|:...
  Fly   619 NQTTMHAN-QILPTQYGRHESNYPHMEYVRE---------RHNSSGGN---------NNGTAPAA 664

  Fly   633 QENNSLRLRIYSYNQKGRSAA-------YLLTDFIIGSTAYKTDDDVTLTLSPVIVGSVLTIIII 690
            ..||     :.:.|.:||::|       ..||...:.....:|....:.||:.:           
  Fly   665 GRNN-----VANKNMRGRTSAGQAKSNNKQLTQQQLQRLKKRTSFTPSQTLAAI----------- 713

  Fly   691 GVAIAIRIFVVTFVHNLRRNR-------------HHGSKATAAGVTAQPSDVFKGGNLEKPRWQH 742
                           ..:|.|             ||.:.||.:|...:|.     |:..|     
  Fly   714 ---------------ERQRQRKQLSQQQQQLQQQHHQATATKSGGDNKPD-----GSPAK----- 753

  Fly   743 TDIKTKSSEDLVEDERDPDVIPSQ----------YVGGSSAGSSGSNA-SNVGSTTAGTATGSST 796
                 .|.:.:....|||.:...|          :...|...|....| ||:.::..|..:.||:
  Fly   754 -----SSKQRMRRASRDPQIQQQQQHQQQQQHQLHAATSITSSQRKQAESNLSTSHLGKGSSSSS 813

  Fly   797 STAVVANANAAASAMAG--PG-----------------------GATSSASATDGHQFASGTAAA 836
            .:...:::|..:.:..|  |.                       |.|:..::...|.:|      
  Fly   814 RSRRSSSSNINSKSNNGKQPAKYFNKRQKNMHKQKHQQKLKQLKGTTNEHNSNIIHHYA------ 872

  Fly   837 GGGASKWSPNGNVTTTMLTGDAVNATVTYNQINAQRAQLLAAVAAVGGGCSSTVISPSSSILGGL 901
                                 |:::::...:..|.. .:||.|||  ...|:::.||.:|     
  Fly   873 ---------------------ALSSSLRRRKRLAAN-DILATVAA--ASTSASLSSPPAS----- 908

  Fly   902 GKPLGMGMGMGLGMGVGGTVIGSPTSLSSTATLAAHLQPAHSSGVGTLPPGLGSGGGYILNAYAS 966
                                  |..||::|||.|..::...|:   ...|...||..   |..:.
  Fly   909 ----------------------SAASLAATATAAVEIEQDVSA---VDAPAADSGSN---NKRSR 945

  Fly   967 GRLHHPPGGGVPGGATHTATLNRHHHQQQQLHHHPHH-----QQP--HHSGSSLLMGSAGSVMGV 1024
            ..|               ..|::...||:|....|.:     .||  ..||:::...:|.|..|.
  Fly   946 KSL---------------TILDKQKQQQEQQQLLPPNAPQISNQPVAAISGNNVKETAATSAHGA 995

  Fly  1025 V--GSTTTATTSCNSSQDLDDN 1044
            |  |....|.:|...|.|.|::
  Fly   996 VAAGVKDKAPSSKEDSTDNDND 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IINP_001014485.3 IG_like 55..160 CDD:214653 56/110 (51%)
Ig 57..160 CDD:299845 56/108 (52%)
Ig 188..251 CDD:299845 29/67 (43%)
Ig 289..363 CDD:299845 21/75 (28%)
IG_like 289..351 CDD:214653 20/63 (32%)
Ig_2 376..460 CDD:290606 45/83 (54%)
IG_like 383..454 CDD:214653 37/70 (53%)
Ig 470..548 CDD:299845 29/104 (28%)
IG_like 481..557 CDD:214653 30/102 (29%)
side-IIINP_001036681.1 IG_like 59..166 CDD:214653 56/108 (52%)
V-set 59..166 CDD:284989 56/108 (52%)
ig 190..268 CDD:278476 35/81 (43%)
IG_like 192..259 CDD:214653 31/70 (44%)
Ig 296..361 CDD:299845 20/64 (31%)
IG_like 391..468 CDD:214653 39/76 (51%)
IGc2 392..454 CDD:197706 31/61 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I12487
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10137at7147
OrthoFinder 1 1.000 - - FOG0002810
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23278
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1676
76.920

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