DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-II and side-V

DIOPT Version :10

Sequence 1:NP_001400995.1 Gene:side-II / 3346206 FlyBaseID:FBgn0259213 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_611765.2 Gene:side-V / 37679 FlyBaseID:FBgn0085400 Length:1174 Species:Drosophila melanogaster


Alignment Length:1165 Identity:309/1165 - (26%)
Similarity:479/1165 - (41%) Gaps:310/1165 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DSHVKTKD-------IDAVEGKSVSLPC---PITEPLDNVYMVLWFRDNAGIPLYSFDVRDKESR 103
            :.|..|.|       :.|| |..|:|||   |.|..:|.|.:|:|:|.....|:|:||.|.:   
  Fly    30 EQHPATADEGPLSEILTAV-GSEVALPCDLVPGTGIVDKVQLVIWYRQGNVKPIYTFDARGR--- 90

  Fly   104 EQPRH----WSAPEVFGSRAKFHFDSQPATLEIKDIKRHDQGIYRCRVDFRTSQTQSFRFNLSVI 164
              |.:    |:...||..:|.||.|:.|..|.||:|:..|.|:|:|||||..|.|:::|.|::|:
  Fly    91 --PLNLGIPWADESVFNKKAHFHHDTDPPALRIKNIQTSDAGLYKCRVDFHKSPTRNWRINVTVL 153

  Fly   165 ILPEQPIIMDRWGRQLNGTQLGPKQEGDDIVITCRVVGGRPQPQVRWLVNGLLVDNQNEHNSGDV 229
            :.|....|:|..|.::.....||..|||.|.:||...||.|.|:|.|.....|:|:..:......
  Fly   154 VPPTALTILDHHGAEIRDQTAGPYLEGDSIDLTCLSSGGVPPPRVSWWREHALIDDSFQVLPDGS 218

  Fly   230 IENRLLWPSVQRNDLNSVFTCQALNTQLDKPKEKSFILDMHLKPLVVKILEPPSSMIADRRYEVS 294
            :.|.|...::||.||.:::||||.|..:.....|..||||:|.||.:.:.....::||..|..|:
  Fly   219 VRNVLRLKNIQRKDLLTMYTCQASNGHVVPALTKKVILDMNLPPLSLLLQGLNHAVIAGTRSHVT 283

  Fly   295 CESSGSRPNAIITWYKGKRQLRRTKDDISK--NSTRSELSFVPTTDDDGKSITCRAE-NPNV--- 353
            |.:.|:||...|.|.|..:.:|......|.  |:|.|||..:|..:|:.:.:.|... |..:   
  Fly   284 CTAIGARPPPEIIWSKAGQIVRGATSSTSSDGNTTISELMLIPVPEDNERQVVCSISLNAGITSQ 348

  Fly   354 -----------------NGLYLETMWKLNVVYPPLVTLRLGSTLTPDDIKEGDDVYFECHVQSNP 401
                             .||||:....|||.:.|:|.|.||:.|.||::.:|.|||.||.|::||
  Fly   349 QLHEGHTTVMTTLGNGHTGLYLKDSRVLNVTHAPIVNLNLGAPLDPDNLLKGTDVYLECDVKANP 413

  Fly   402 QWRKLLWLHNGIHLEHNTSARVIRSNQSLVLQKITKHYAGNYACSAINDEGETVSNQLPLRVKYT 466
            ...::.|.|:...|  ::|..:|.|||:||||.|:|...|.|.|.|.|.:|...||::.|.|||.
  Fly   414 AITRVEWYHSDKQL--HSSRGIIISNQTLVLQGISKSSHGQYFCRASNLQGSVSSNEVYLDVKYP 476

  Fly   467 PMCKHADRVILIGASKDETVEVVCEIQADPPPR-TFRWKFNNSGETL------------------ 512
            |:||....:  |.|:..:|:.:.||:.|:|... .::|.||||.|:|                  
  Fly   477 PVCKSESTI--IRAALKQTINITCEVDANPVDNLNYKWHFNNSLESLIELPQLGQGAPVMLASGS 539

  Fly   513 --------------------------------------------------DVG------------ 515
                                                              :||            
  Fly   540 DQSGYYQRSKRKHSHGMQQRLLHGRHGRMAAVRFEDEDEDGYGEFEEYGDEVGQPFTQMVYSNMV 604

  Fly   516 -----------------------SERFSVNGS--------------------------------- 524
                                   .::.:..||                                 
  Fly   605 HKNHVESSKQQQRKQLSPQQQQQQQQMASGGSSGDSHTPSGGVILERKRLVALHKQHHRGGVATP 669

  Fly   525 ---------RSILKYTPVTDQDYGTLSCWASNEVGTQQHPCLFQVVLAALPNAVSNCTVFNRTEL 580
                     .::..|...:.:.:|.:||.||:.:| ...||.:.:..|.||..|.|||.:|.|..
  Fly   670 PTTTAAPPLNNVYSYHVESYESFGAISCVASSPMG-HSAPCWYHIQPADLPEPVKNCTAYNATAN 733

  Fly   581 SVDIQCIPGYDGGLPQIFVLEMFSTRTGITRFNLSNA--EEALFSLENLDTLTSMMVQENNSLRL 643
            |:.||||||||||:||.|..:::..   :.|..|.||  :.:.|:::.|.: .|:.|       :
  Fly   734 SLQIQCIPGYDGGIPQHFHAQIYDE---LNRQILYNASYKYSEFTVKRLPS-DSVFV-------I 787

  Fly   644 RIYSYNQKGRS-AAYLLTDFIIGSTAYKTDDD--VTLTLSPV---IVGSVLTIIIIGVAIAIRIF 702
            ||.:.|.:|.| .||.|....:.:...:|...  |.:.|:|:   :||.:.|:|::.:.:.|   
  Fly   788 RITAVNAQGASKVAYRLRGRTLSAPLLRTASSTAVLVQLTPLLGALVGVIATLILVAICVVI--- 849

  Fly   703 VVTFVHNLRRNRHHGSKATAAGVTAQPSDVFKGGNLEKPRWQHTDIKTKSSEDLVEDERDPDVIP 767
            |:.| .:.|..|.|||.|.|   |...:|......|.:....|:.:          ::::|||:|
  Fly   850 VIKF-RSKRGGRRHGSGADA---TTTEADKGSAEPLSRNMGSHSSL----------EDKNPDVVP 900

  Fly   768 SQ-------------------------YVGGSSAGSSGSNASNVGSTTAGTATGSSTSTAVVA-- 805
            .:                         |...:...::.....:: |.|.|...|..:.|...|  
  Fly   901 QEANSEDEFHQEEKAFDRLNMESQRILYTPPTRINTASPPPPSL-SPTFGKQYGELSLTTNPAFS 964

  Fly   806 --NANAAASAM----------------------------AGPGGATSSASATDGHQFASGTAAAG 840
              |....|.|:                            .|.||||.:|:...|:..    .|..
  Fly   965 LYNTPQRAPAVQRPVYTAPPPLLSTRTPPNIYTRIPGRGGGGGGATVTAAGAGGYHL----PAYE 1025

  Fly   841 GGASKWSPNGNVTT-TM-LTGDAVNATVTYNQINAQRAQLLAAVAAVGGGCSSTVISPSSSILGG 903
            ...|..||.|:.|| || |.|...|.::       |...:......||||..:|:..|.|..:||
  Fly  1026 TRTSPTSPYGSTTTCTMPLLGGQSNGSL-------QSGGVGGVGGLVGGGACNTLPHPGSLHVGG 1083

  Fly   904 LGKPLGMGMGMG-LGMGVGGTVIGSPTSLSSTATLAAHLQPAHSSGVGTLPPGLGSGGGY 962
            :...|...:..| :.:|...:::.||.  |.|||.:..|....|      |..:|.||.|
  Fly  1084 ISAALTSSVTSGNITIGAAQSLLTSPR--SQTATYSTTLGGVQS------PLLMGGGGNY 1135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IINP_001400995.1 V-set 55..163 CDD:462230 45/121 (37%)
Ig_3 190..254 CDD:464046 24/63 (38%)
Ig <292..366 CDD:472250 24/96 (25%)
Ig strand B 292..295 CDD:409418 1/2 (50%)
Ig strand C 305..309 CDD:409418 1/3 (33%)
Ig strand E 329..333 CDD:409418 3/3 (100%)
Ig strand F 343..348 CDD:409418 1/4 (25%)
Ig strand G 359..362 CDD:409418 0/2 (0%)
Ig 382..457 CDD:472250 31/74 (42%)
Ig strand B 391..395 CDD:409405 2/3 (67%)
Ig strand C 405..409 CDD:409405 0/3 (0%)
Ig strand E 428..432 CDD:409405 2/3 (67%)
Ig strand F 442..447 CDD:409405 2/4 (50%)
Ig 486..554 CDD:409353 22/213 (10%)
Ig strand B 486..490 CDD:409353 0/3 (0%)
Ig strand C 500..504 CDD:409353 0/3 (0%)
Ig strand E 526..530 CDD:409353 0/3 (0%)
Ig strand F 540..545 CDD:409353 2/4 (50%)
side-VNP_611765.2 V-set 42..153 CDD:462230 44/116 (38%)
Ig_3 178..243 CDD:464046 24/64 (38%)
Ig 274..359 CDD:472250 22/84 (26%)
Ig strand B 280..284 CDD:409353 1/3 (33%)
Ig strand C 294..298 CDD:409353 1/3 (33%)
Ig strand E 320..324 CDD:409353 3/3 (100%)
Ig strand F 334..345 CDD:409353 2/10 (20%)
Ig strand G 355..358 CDD:409353 0/2 (0%)
Ig 400..466 CDD:472250 29/67 (43%)
Ig strand B 403..407 CDD:409353 2/3 (67%)
Ig strand C 416..421 CDD:409353 0/4 (0%)
Ig strand E 438..442 CDD:409353 2/3 (67%)
Ig strand F 452..457 CDD:409353 2/4 (50%)
Ig strand G 465..468 CDD:409353 1/2 (50%)
FN3 719..798 CDD:214495 33/89 (37%)

Return to query results.
Submit another query.