DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-II and SIGLEC8

DIOPT Version :9

Sequence 1:NP_001014485.3 Gene:side-II / 3346206 FlyBaseID:FBgn0259213 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_055257.2 Gene:SIGLEC8 / 27181 HGNCID:10877 Length:499 Species:Homo sapiens


Alignment Length:645 Identity:127/645 - (19%)
Similarity:199/645 - (30%) Gaps:249/645 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVLLLAMALLMPVTLARLHSTSGVGMSGGGSSMGPGGGGSGSGGISSKDSHVKTKDIDAV-EGKS 64
            |:|||   ||:|:    |..|.|:          .|....|.|.:      ::.:::..| ||..
Human     1 MLLLL---LLLPL----LWGTKGM----------EGDRQYGDGYL------LQVQELVTVQEGLC 42

  Fly    65 VSLPCPITEPLDNVYMVLWFRDNAGIPLYSFDVRDKESREQPRHWSAP--EVFG-SRAKFHF--- 123
            |.:||..:.|.|.     | .|:..:..|.|...|:..::.|...:.|  ||.. ::.:|..   
Human    43 VHVPCSFSYPQDG-----W-TDSDPVHGYWFRAGDRPYQDAPVATNNPDREVQAETQGRFQLLGD 101

  Fly   124 ----DSQPATLEIKRHDQGIYRCRVDFRTSQTQSFRFNLS---------VIILPEQPIIMDRWGR 175
                |...:..:.::.|:|.|..|:: |.|...|::..|:         |..|..:|.|:     
Human   102 IWSNDCSLSIRDARKRDKGSYFFRLE-RGSMKWSYKSQLNYKTKQLSVFVTALTHRPDIL----- 160

  Fly   176 QLNGTQLGPKQEGDDIVITCRV----VGGRPQPQVRWLVNGLLVDNQNEHNSGDVIENRLLWPSV 236
                 .||..:.|....:||.|    ..|.| |.:.|:  |..|.:..              |:.
Human   161 -----ILGTLESGHSRNLTCSVPWACKQGTP-PMISWI--GASVSSPG--------------PTT 203

  Fly   237 QRNDLNSVFTCQALNTQLDKPKEKSFILDMHLKPLVVKILEPPSSMIADRRYEVSCESSGSRPNA 301
            .|:                                                              
Human   204 ARS-------------------------------------------------------------- 206

  Fly   302 IITWYKGKRQLRRTKDDISKNSTRSELSFVPTTDDDGKSITCRAENPNVNGLYLETMWKLNVVYP 366
                                    |.|:..|...|.|.|:||:...|. .|:...:..:|:|.||
Human   207 ------------------------SVLTLTPKPQDHGTSLTCQVTLPG-TGVTTTSTVRLDVSYP 246

  Fly   367 P--------------LVTLRLGSTLTPDDIKEGDDVYFECHVQSNPQWRKLLWLHNGIHLEHNTS 417
            |              ...|..||:|:   :.||..:...|.|.|||..| |.|....:.|..:.|
Human   247 PWNLTMTVFQGDATASTALGNGSSLS---VLEGQSLRLVCAVNSNPPAR-LSWTRGSLTLCPSRS 307

  Fly   418 ARVIRSNQSLV-LQKITKHYAGNYACSAINDEG-ETVSNQLPLRVKYTPMCKHADRVIL-----I 475
                 ||..|: |.::.....|.:.|.|.|.:| :.:|..|.|:.:.|...:...:|.|     .
Human   308 -----SNPGLLELPRVHVRDEGEFTCRAQNAQGSQHISLSLSLQNEGTGTSRPVSQVTLAAVGGA 367

  Fly   476 GASK----------------------------DETVEVVCEIQ--ADPPPRTFRWKFNN------ 504
            ||:.                            |..:|....|:  |...|.|..||..|      
Human   368 GATALAFLSFCIIFIIVRSCRKKSARPAAGVGDTGMEDAKAIRGSASQGPLTESWKDGNPLKKPP 432

  Fly   505 ------SGETLDVGSERFSVNGSRSILKYTP----VTDQDYGTLSCWASNEVGTQQHPCL 554
                  |||.   |...::......:....|    .||.:|..:.........||  .||
Human   433 PAVAPSSGEE---GELHYATLSFHKVKPQDPQGQEATDSEYSEIKIHKRETAETQ--ACL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IINP_001014485.3 IG_like 55..160 CDD:214653 27/124 (22%)
Ig 57..160 CDD:299845 27/122 (22%)
Ig 188..251 CDD:299845 12/66 (18%)
Ig 289..363 CDD:299845 11/73 (15%)
IG_like 289..351 CDD:214653 9/61 (15%)
Ig_2 376..460 CDD:290606 25/85 (29%)
IG_like 383..454 CDD:214653 21/72 (29%)
Ig 470..548 CDD:299845 21/128 (16%)
IG_like 481..557 CDD:214653 20/92 (22%)
SIGLEC8NP_055257.2 Ig 27..151 CDD:299845 27/136 (20%)
Carbohydrate binding. /evidence=ECO:0000269|PubMed:27357658, ECO:0007744|PDB:2N7B 72..75 0/2 (0%)
Carbohydrate binding. /evidence=ECO:0000269|PubMed:27357658, ECO:0007744|PDB:2N7B 134..138 1/3 (33%)
Ig 171..229 CDD:299845 19/160 (12%)
IG_like 269..344 CDD:214653 24/83 (29%)
IGc2 275..335 CDD:197706 20/65 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 410..443 9/35 (26%)
ITIM motif 445..450 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 451..470 3/18 (17%)
SLAM-like motif 468..473 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 478..499 4/12 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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