| Sequence 1: | NP_001400995.1 | Gene: | side-II / 3346206 | FlyBaseID: | FBgn0259213 | Length: | 1067 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_011244430.1 | Gene: | Cadm2 / 239857 | MGIID: | 2442722 | Length: | 458 | Species: | Mus musculus |
| Alignment Length: | 417 | Identity: | 80/417 - (19%) |
|---|---|---|---|
| Similarity: | 136/417 - (32%) | Gaps: | 156/417 - (37%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 54 TKDIDAVEGKSVSLPCPITEPLDNVYMVLWFRDNAGIPLYSFDVRDKESREQPRHWSAPEVFGSR 118
Fly 119 AKFHFDSQPA----------------TLEIKDIKRHDQGIYRCRVDFRTSQTQSFRFNLSVIILP 167
Fly 168 EQPIIMDRWGRQLNGTQLGPKQEGDDIVITCRVVGGRPQPQVRWLVNGLLVDNQNEHNSGDVIEN 232
Fly 233 RLLWPSVQRNDLNSVFTCQALNTQLDKPKEKSFILDMHLKPLVVKILEPPSSMIADRRYEVSCES 297
Fly 298 SGSRPNAIITWYKGKRQLRRTKDDISKNSTRSELSFVPTTDDDGKSITCRAENPNVNGLYLETMW 362
Fly 363 KLNVVYPPLVTLRLGSTLTPDDIKEGDDVYFECHVQSNPQWRKLLWLHNGIHLEHNTSARVIRSN 427
Fly 428 QSLVLQKITKHYAGNYACSAINDEGET 454 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| side-II | NP_001400995.1 | V-set | 55..163 | CDD:462230 | 20/123 (16%) |
| Ig_3 | 190..254 | CDD:464046 | 10/63 (16%) | ||
| Ig | <292..366 | CDD:472250 | 13/73 (18%) | ||
| Ig strand B | 292..295 | CDD:409418 | 0/2 (0%) | ||
| Ig strand C | 305..309 | CDD:409418 | 0/3 (0%) | ||
| Ig strand E | 329..333 | CDD:409418 | 2/3 (67%) | ||
| Ig strand F | 343..348 | CDD:409418 | 1/4 (25%) | ||
| Ig strand G | 359..362 | CDD:409418 | 0/2 (0%) | ||
| Ig | 382..457 | CDD:472250 | 19/73 (26%) | ||
| Ig strand B | 391..395 | CDD:409405 | 0/3 (0%) | ||
| Ig strand C | 405..409 | CDD:409405 | 1/3 (33%) | ||
| Ig strand E | 428..432 | CDD:409405 | 1/3 (33%) | ||
| Ig strand F | 442..447 | CDD:409405 | 2/4 (50%) | ||
| Ig | 486..554 | CDD:409353 | |||
| Ig strand B | 486..490 | CDD:409353 | |||
| Ig strand C | 500..504 | CDD:409353 | |||
| Ig strand E | 526..530 | CDD:409353 | |||
| Ig strand F | 540..545 | CDD:409353 | |||
| Cadm2 | XP_011244430.1 | MtrA | <9..>56 | CDD:453061 | 1/3 (33%) |
| IgV_1_Necl-3 | 49..144 | CDD:409498 | 21/125 (17%) | ||
| Ig strand A | 49..52 | CDD:409498 | 80/417 (19%) | ||
| FR1 | 50..68 | CDD:409498 | 5/15 (33%) | ||
| Ig strand A' | 53..59 | CDD:409498 | 0/5 (0%) | ||
| Ig strand B | 61..69 | CDD:409498 | 2/7 (29%) | ||
| CDR1 | 69..74 | CDD:409498 | 0/15 (0%) | ||
| FR2 | 75..82 | CDD:409498 | 2/23 (9%) | ||
| Ig strand C | 75..81 | CDD:409498 | 1/22 (5%) | ||
| CDR2 | 83..94 | CDD:409498 | 2/10 (20%) | ||
| Ig strand C' | 85..89 | CDD:409498 | 0/3 (0%) | ||
| Ig strand C' | 91..94 | CDD:409498 | 0/2 (0%) | ||
| FR3 | 95..130 | CDD:409498 | 5/36 (14%) | ||
| Ig strand D | 99..106 | CDD:409498 | 0/6 (0%) | ||
| Ig strand E | 109..115 | CDD:409498 | 0/5 (0%) | ||
| Ig strand F | 122..130 | CDD:409498 | 3/9 (33%) | ||
| CDR3 | 131..134 | CDD:409498 | 1/2 (50%) | ||
| Ig strand G | 134..144 | CDD:409498 | 1/9 (11%) | ||
| FR4 | 136..143 | CDD:409498 | 1/6 (17%) | ||
| IgI_2_Necl-3 | 143..246 | CDD:409467 | 35/202 (17%) | ||
| Ig strand A | 144..147 | CDD:409467 | 0/2 (0%) | ||
| Ig strand A' | 150..154 | CDD:409467 | 2/11 (18%) | ||
| Ig strand B | 163..173 | CDD:409467 | 3/9 (33%) | ||
| Ig strand C | 176..185 | CDD:409467 | 3/8 (38%) | ||
| Ig strand C' | 186..189 | CDD:409467 | 1/2 (50%) | ||
| Ig strand D | 191..198 | CDD:409467 | 3/23 (13%) | ||
| Ig strand E | 204..214 | CDD:409467 | 2/30 (7%) | ||
| Ig strand F | 222..230 | CDD:409467 | 2/7 (29%) | ||
| Ig strand G | 238..245 | CDD:409467 | 1/6 (17%) | ||
| Ig_3 | 250..323 | CDD:464046 | 21/78 (27%) | ||
| 4.1m | 411..429 | CDD:128590 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||