DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-II and si:ch211-180a12.2

DIOPT Version :9

Sequence 1:NP_001014485.3 Gene:side-II / 3346206 FlyBaseID:FBgn0259213 Length:1064 Species:Drosophila melanogaster
Sequence 2:XP_001920945.3 Gene:si:ch211-180a12.2 / 100150385 ZFINID:ZDB-GENE-121214-236 Length:903 Species:Danio rerio


Alignment Length:696 Identity:141/696 - (20%)
Similarity:221/696 - (31%) Gaps:242/696 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DIDAVEGKSVSLPCPITEP--LDNVYMVLWFRDNAGIPLYSFDVRDKESREQPRHWSAPEVFGSR 118
            |:....|.|..|.|....|  :||..:.:.:.....|      :..|      .|..|.....|.
Zfish    22 DVSVSPGSSTVLNCSFALPALVDNSLLNITWSSGGSI------IASK------NHTQAGFFLNST 74

  Fly   119 AKFHFDSQPATL-EIKRHDQGIYRCRV-----DFRTSQTQSFRFNLSV-------IILPEQPI-- 168
            |   |.|.|.|: ....|.||:|.|||     |:.|..|      |::       ||.||..:  
Zfish    75 A---FPSFPLTVFNATPHQQGVYECRVSYNDTDYATEVT------LTILAPPVVSIISPEAVLKR 130

  Fly   169 --IMDRWGRQLNGTQLGPKQEGDDIVITCRVVGGRPQ-PQVRWLVNGLLVDNQNEHNSGDVIENR 230
              :::.|.|..:..|         |:.|....|.:.| ||       .|..|:.|....|.:...
Zfish   131 KSVVECWARSFSPPQ---------IMFTWTRGGNKIQEPQ-------KLQVNRTEDGLYDAVSFL 179

  Fly   231 LLWPSVQRNDLNSVFTCQALNTQLDKPKEKSFILDMHLKPLVVKILEPPSSMIADRRYEVSCESS 295
            ...|.:...:::  |.|:..::.|.||..:.|...:.:.|.|...:.|.||..:.  ..:||:.|
Zfish   180 TFIPQISNQNIS--FGCEVQHSALVKPVLEEFTPHITVLPKVTLSVVPSSSHSSS--VTLSCDIS 240

  Fly   296 GSRPNAI-ITW-YKGKR-------------QLRR------TKDDISKNSTRSELSFVPTTDD--- 336
            |..||.| :.| :.||:             ..||      |:::.|:......::..|:..:   
Zfish   241 GFYPNNISVLWIHNGKKLSELPLSIQNEDGTYRRHQYHTLTREERSRGGEVQCVALQPSGQEPAN 305

  Fly   337 ---DGKSITCRAENPNVNG------------------LYLETMWK--------LN---VVYPPLV 369
               |..::..|.:||.:|.                  |.....||        ||   :|.||.|
Zfish   306 GTIDLSTVDLRVQNPGLNKSAKASVAMMIISLTLVFLLCFGFSWKRRDEKLKSLNISAIVLPPRV 370

  Fly   370 TL----------------RLGSTLTPDDIKEGDDVYFECHVQSNPQWRKLLWLHNGIHLEHNTSA 418
            .:                |:.:|...:||...|..:.|         :|.....:..:...|:|.
Zfish   371 VVGKKGRVTISVEGRLAERVQTTWFLNDIPIKDTSHKE---------KKYGAFRSASYTSRNSSV 426

  Fly   419 RVIRSNQSLVLQKITKHYAGNYACSAINDEGETVSNQLPLR------------VKYTP------- 464
            .|:.....|:....:.:|              .:..|:|||            |.:.|       
Zfish   427 SVLSEKNPLLPSSASGYY--------------KLHTQMPLRSSSNSSKQLFSSVTFIPSLAVHKG 477

  Fly   465 ---MC----KHADRVILIGASKDETV---EVVCEIQADPPPR-------------------TFRW 500
               .|    |..|:::....|:..|:   ..|.|||...|..                   ||||
Zfish   478 SVFKCQVSYKGKDKIVAERVSEKFTILAPPEVSEIQFSEPNEEGGVVTMTAHASHFHPDIITFRW 542

  Fly   501 KFNNSGE--------------------------------TLDVGSERFSVNGSRSILKYTPVTDQ 533
             |...||                                .|:.|..|..|....:.|| .|:|.|
Zfish   543 -FCEGGELSPVSIPQALAAPRPDAEGFFSAMSQCRLPKAELERGETRVWVTIHHTALK-QPITRQ 605

  Fly   534 DYGTLSCWASNEVGTQQHPCLFQVVLAALPNAVSNCTVFNRTELSV 579
            ..|.:...:.:|:.:    |....||..........|.|...|:||
Zfish   606 TRGFIKQPSISEILS----CPVASVLEGRLTLACEITGFYPPEISV 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IINP_001014485.3 IG_like 55..160 CDD:214653 29/111 (26%)
Ig 57..160 CDD:299845 28/110 (25%)
Ig 188..251 CDD:299845 13/63 (21%)
Ig 289..363 CDD:299845 25/129 (19%)
IG_like 289..351 CDD:214653 19/88 (22%)
Ig_2 376..460 CDD:290606 15/95 (16%)
IG_like 383..454 CDD:214653 8/70 (11%)
Ig 470..548 CDD:299845 26/131 (20%)
IG_like 481..557 CDD:214653 25/129 (19%)
si:ch211-180a12.2XP_001920945.3 Ig 19..114 CDD:299845 29/112 (26%)
IG_like 22..113 CDD:214653 29/111 (26%)
C1-set 123..205 CDD:284964 20/99 (20%)
IgC 237..309 CDD:143166 14/71 (20%)
IgC 515..604 CDD:143166 15/90 (17%)
IgC 609..720 CDD:143166 9/43 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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