DRSC/TRiP Functional Genomics Resources

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Protein Alignment Unc-89 and RCK2

DIOPT Version :9

Sequence 1:NP_001097440.1 Gene:Unc-89 / 3346201 FlyBaseID:FBgn0053519 Length:4218 Species:Drosophila melanogaster
Sequence 2:NP_013349.1 Gene:RCK2 / 850950 SGDID:S000004238 Length:610 Species:Saccharomyces cerevisiae


Alignment Length:637 Identity:148/637 - (23%)
Similarity:244/637 - (38%) Gaps:172/637 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  3017 GRFDQSYTRN---GQATLFINKML-DRDVGWYEAVATNEHGEARQRVRLEIAEHPRFLKRPDETF 3077
            |:...|.|.|   .|.|....|.. |:::..|.:|..::|             |.:.|  .||..
Yeast    28 GKTRSSGTNNKDVSQITSSPKKSFQDKNIVQYPSVVADDH-------------HMKSL--TDELV 77

  Fly  3078 IMARKNG---------RIEAKLVGIPLPEVHWFKDWKPIVDSSRIKISSYDPDIYVLSIHDSIIK 3133
            .....:.         .:|. :..:|..:||         :||..::||           |.:|.
Yeast    78 TTIDSDSSPSDNITTENVET-VTSVPAIDVH---------ESSEGQLSS-----------DPLIS 121

  Fly  3134 DGGLYSISARNIAGSISTSVTVHIEEN-EDQYIYKTYGRHPYVRSKQLRYQDKYDIGDELGRGTQ 3197
            |..|...|  .|...|....|  .::| ||:...|:     ::..|:|   ..|.:.:::|.|..
Yeast   122 DESLSEQS--EIISDIQDDST--DDDNMEDEIPEKS-----FLEQKEL---IGYKLINKIGEGAF 174

  Fly  3198 GITYHAV--ERSSGD----NY---AAKIM--------------------YGRPELRPFMLNELEM 3233
            ...:.|:  :.||.:    ||   |.|::                    ..:...|..:|.|:.:
Yeast   175 SKVFRAIPAKNSSNEFLTKNYKAVAIKVIKKADLSSINGDHRKKDKGKDSTKTSSRDQVLKEVAL 239

  Fly  3234 MNTFNH--KNLIRPYDAYDTDRSVTLIMELAAGGELVRDNLLRRDYYTERDIAHYIRQTLWGLEH 3296
            ..|.:.  ..::...|..:||....:|.||..|||:..: ::|..|::|....|.|:|....::|
Yeast   240 HKTVSAGCSQIVAFIDFQETDSYYYIIQELLTGGEIFGE-IVRLTYFSEDLSRHVIKQLALAVKH 303

  Fly  3297 MHEMGVGHMGLTIKDLLISV-----------------------------VGG---DIIKVSDFGL 3329
            ||.:||.|..:..::||...                             |||   .|:|::||||
Yeast   304 MHSLGVVHRDIKPENLLFEPIEFTRSIKPKLRKSDDPQTKADEGIFTPGVGGGGIGIVKLADFGL 368

  Fly  3330 SRKINRHNLSTLDYGMPEFVSPEVVNKEGVNFSHDMWTVGLITYVLLGGHNPFLGIDDR-ETLT- 3392
            |::|...|..| ..|...:.:||||..|..:...|||.:|.:.|.:|.|..||  .|:: :||| 
Yeast   369 SKQIFSKNTKT-PCGTVGYTAPEVVKDEHYSMKVDMWGIGCVLYTMLCGFPPF--YDEKIDTLTE 430

  Fly  3393 KIREGRWDFKDEIWTHISDDGRDFISRLLLYSPEERMDVKTALKHPW---FFMLDRPVYDHDYQI 3454
            ||..|.:.|....|..||...::.:::||...|.:|.|:...|..||   |..|.:.......:.
Yeast   431 KISRGEYTFLKPWWDEISAGAKNAVAKLLELEPSKRYDIDQFLDDPWLNTFDCLPKEGESSQKKA 495

  Fly  3455 GTDRLRNYYDHFRDWYANASCKNYFRRRRLSGCFQHPSKMVYPPGHV-----YTPENTPEPLPEP 3514
            ||...|:.:            |..|:      .||..|.:::.|..|     :...|..:...|.
Yeast   496 GTSERRHPH------------KKQFQ------LFQRDSSLLFSPAAVAMRDAFDIGNAVKRTEED 542

  Fly  3515 RI--------RAKREEVVSKY--LHPDYELGLIQSESHYQYGPDT-YLLQLR 3555
            |:        .|:.||:...|  ...|.:|    .::.:|...|| .:||.|
Yeast   543 RMGTRGGLGSLAEDEELEDSYSGAQGDEQL----EQNMFQLTLDTSTILQRR 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Unc-89NP_001097440.1 RhoGEF 90..260 CDD:238091
PH_unc89 275..388 CDD:270134
Atrophin-1 <493..690 CDD:331285
TonB_N 502..>596 CDD:318287
I-set 1017..1108 CDD:333254
I-set 1123..1212 CDD:254352
I-set <1236..1299 CDD:333254
I-set 1313..1403 CDD:254352
Ig_3 1406..1487 CDD:316449
I-set 1499..1595 CDD:254352
I-set 1599..1690 CDD:333254
I-set 1694..1786 CDD:254352
I-set <1836..1903 CDD:333254
I-set 1922..2005 CDD:333254
I-set 2018..2108 CDD:333254
I-set 2113..2214 CDD:333254
I-set 2220..2302 CDD:254352
I-set 2318..2408 CDD:254352
I-set 2415..2506 CDD:254352
I-set 2519..2608 CDD:254352
I-set 2615..2696 CDD:254352
I-set 2717..2805 CDD:254352
FN3 2834..2925 CDD:238020
I-set <2996..3063 CDD:333254 11/49 (22%)
I-set 3067..3157 CDD:333254 19/98 (19%)
PK_Unc-89_rpt1 3182..3440 CDD:271011 84/325 (26%)
I-set 3654..3744 CDD:333254
FN3 3748..3840 CDD:238020
STKc_Unc-89_rpt2 3893..4151 CDD:271014
RCK2NP_013349.1 STKc_RCK1-like 161..478 CDD:270998 83/320 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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