DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Unc-89 and pskh1

DIOPT Version :9

Sequence 1:NP_001097440.1 Gene:Unc-89 / 3346201 FlyBaseID:FBgn0053519 Length:4218 Species:Drosophila melanogaster
Sequence 2:NP_001018546.1 Gene:pskh1 / 554840 ZFINID:ZDB-GENE-050119-1 Length:422 Species:Danio rerio


Alignment Length:410 Identity:117/410 - (28%)
Similarity:184/410 - (44%) Gaps:77/410 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  3114 KISSYDPDIYVLSIHDSIIK-DGGLYSISARNIAGSISTSVTVHIEENEDQYIYKTYGRHPYV-- 3175
            |:..:..|:|     .:.|| |||      ....||.|       .:.:.|.:.|.....|..  
Zfish    23 KVEPHQTDVY-----KNFIKYDGG------GEKTGSPS-------PQGQSQAVAKVSQSPPPAND 69

  Fly  3176 --------RSKQLRYQ--------DKYDIGDELGRGTQGITYHAVERSSGDNYAAKIMYGR-PEL 3223
                    |.|..:|:        .||||...:|||:.........||:...||.|::..| .|.
Zfish    70 QPEPADSHRKKVAKYRAKFDPRVTAKYDIKALIGRGSFSRVVRVEHRSTRQPYAIKMIETRYREG 134

  Fly  3224 RPFMLNELEMMNTFNHKNLIRPYDAYDTDRSVTLIMELAAGGELVRDNLLRRDYYTERDIAHYIR 3288
            |....:||.::....|.|:|:..:.::|...|.::||||.||||. |.::.|..:||||....::
Zfish   135 REVCESELCVLRRVRHTNIIQLMEVFETAERVYMVMELATGGELF-DRIITRGSFTERDATRVLQ 198

  Fly  3289 QTLWGLEHMHEMGVGHMGLTIKDLLISVVGGDI-IKVSDFGL--SRKINRHNLSTLDYGMPEFVS 3350
            ..|.|::::|.:|:.|..|..::||....|.|. |.::||||  :||.....|.....|.||:::
Zfish   199 MVLDGVKYLHTLGITHRDLKPENLLYYHPGADSKIMITDFGLASTRKKGDECLMKTTCGTPEYIA 263

  Fly  3351 PEVVNKEGVNFSHDMWTVGLITYVLLGGHNPFLGIDDRETLTKIREGRWDFKDEIWTHISDDGRD 3415
            ||::.::....:.|||.:|:|:|:||.|..||...:......:|.:|::.|..|.|..:|:..:|
Zfish   264 PEILVRKPYTNAVDMWALGVISYILLSGTMPFEDDNRMRLYRQILKGKYSFSGEPWPSVSNLAKD 328

  Fly  3416 FISRLLLYSPEERMDVKTALKHPWFFMLDRPVYDHDYQIGTDRLRNYYDHFRDWYANASCKNYFR 3480
            ||.|:|...|.||:....||||||...:                          .|::|.||..|
Zfish   329 FIDRVLTVDPNERLSAGQALKHPWIVSM--------------------------AASSSMKNLHR 367

  Fly  3481 -------RRRLSGCFQHPSK 3493
                   :|..|.|  |.:|
Zfish   368 SISQNLLKRASSRC--HSTK 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Unc-89NP_001097440.1 RhoGEF 90..260 CDD:238091
PH_unc89 275..388 CDD:270134
Atrophin-1 <493..690 CDD:331285
TonB_N 502..>596 CDD:318287
I-set 1017..1108 CDD:333254
I-set 1123..1212 CDD:254352
I-set <1236..1299 CDD:333254
I-set 1313..1403 CDD:254352
Ig_3 1406..1487 CDD:316449
I-set 1499..1595 CDD:254352
I-set 1599..1690 CDD:333254
I-set 1694..1786 CDD:254352
I-set <1836..1903 CDD:333254
I-set 1922..2005 CDD:333254
I-set 2018..2108 CDD:333254
I-set 2113..2214 CDD:333254
I-set 2220..2302 CDD:254352
I-set 2318..2408 CDD:254352
I-set 2415..2506 CDD:254352
I-set 2519..2608 CDD:254352
I-set 2615..2696 CDD:254352
I-set 2717..2805 CDD:254352
FN3 2834..2925 CDD:238020
I-set <2996..3063 CDD:333254
I-set 3067..3157 CDD:333254 11/43 (26%)
PK_Unc-89_rpt1 3182..3440 CDD:271011 90/269 (33%)
I-set 3654..3744 CDD:333254
FN3 3748..3840 CDD:238020
STKc_Unc-89_rpt2 3893..4151 CDD:271014
pskh1NP_001018546.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..80 12/57 (21%)
STKc_PSKH1 94..353 CDD:270989 89/259 (34%)
S_TKc 96..353 CDD:214567 88/257 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 376..422 5/12 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.