DRSC/TRiP Functional Genomics Resources

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Protein Alignment Unc-89 and Caps2

DIOPT Version :9

Sequence 1:NP_001097440.1 Gene:Unc-89 / 3346201 FlyBaseID:FBgn0053519 Length:4218 Species:Drosophila melanogaster
Sequence 2:XP_011241801.1 Gene:Caps2 / 353025 MGIID:2441980 Length:612 Species:Mus musculus


Alignment Length:562 Identity:114/562 - (20%)
Similarity:189/562 - (33%) Gaps:160/562 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   831 TVLKSKDSTNYAQDTVQKAKARDFLHIFTPPVKKRPIYEIV---EEPVNIFELEGDYTESIADDF 892
            :::.|.:..|::|      .||..:|:...|.:..|....|   :.|.:...|:....:.|.:|.
Mouse    71 SLVDSDEEDNFSQ------TARGTVHVHLNPPRSEPALGWVLPCQRPNSQHRLQEVEQDVIPEDL 129

  Fly   893 REPSADFEARGQSVGG-MDDYYSGYSRASTRRYETKTR----DYDRGTSYDS--TVER------- 943
            ..|:..:..:.|.... |.|.|..|.:.||.:.:..:|    :...|.|.|.  |::|       
Mouse   130 PAPTGKYRLKYQQYASEMKDGYKQYIQRSTEKPKAASRPEATEKVEGASLDDLMTLDRKALLQQG 194

  Fly   944 ---SQYGISSRRDRSSVDKV--EARSSLLATG------------------RTESRAASRAESRAE 985
               |.||..|...:|.|:.|  |.:...:|..                  .|:::.:||....:|
Mouse   195 YADSPYGRQSITRKSDVETVAIEKKKQTVAEQMMMDHLSRAVISDPEQDLNTKNQESSRVPPDSE 259

  Fly   986 SRASYSVAE---SRAGIRSSSRLQE--------------------------------DRPL---- 1011
             ||...|..   ....||::|.|.|                                |:.|    
Mouse   260 -RAPLRVRRRTLHETKIRTNSALTENDLSQKVEFDGRVLSRNGRDACRELIGFFFAHDQSLTVYE 323

  Fly  1012 -------RSVDKPVVVKML--------KSVQVEPGET---AHFEIQFKDQPGLVTWLKDNKPLED 1058
                   |:...|.:.|.:        |..|.|.|:.   |.......|||.|...:|:|..|..
Mouse   324 YRMFGKNRTSVLPFIKKDIYHHQCGRRKGKQYELGDVYTGATLTFLSCDQPSLPKTIKENALLRL 388

  Fly  1059 RLADRITQTAAPMNSYRLDIKNCSETDAGT---------YTIRAQSASETTTVSAQLAVGQA--- 1111
            |:.: |.|.|  :||.:.......|.:|.:         ..|:.:...:.....|::..|..   
Mouse   389 RITN-IDQVA--LNSLKAASAEHGEEEAVSPEAHDQLVLQAIQDKLKEQLHKKGARILTGLGRYF 450

  Fly  1112 PGHDE------TKTNTEPAFL-----VSLKDAEMIENTLFRFMVKIIGDPKPRVKFYKDEKEIL- 1164
            .|.|:      .|.:.:.|..     ||.:|.|.     |..:::..|..|.:|.:.:.::.|. 
Mouse   451 QGLDKEGNGLLEKADFQQALKTFHLEVSEQDFES-----FWLILQGYGHSKNKVDYGEFKRAIFG 510

  Fly  1165 ETND-RIQIIR------DKDYLGFYELVIADVQKTDAGTYSCKATNKHGEANCEAIATTVEDKNP 1222
            |.|: |...:|      |.:..|...::  |::|       |....||... ....:|..|.|:.
Mouse   511 EMNEYRKSFVRKAFMQLDFNKTGIVSVI--DIRK-------CYCAKKHPRV-ISGHSTEEEIKSS 565

  Fly  1223 F-GALSGQILPAGEKPVFQWKRNGEEFDPEERFKVLFGEDED 1263
            | ..|.|......|...      ||..|..|...:....|||
Mouse   566 FLETLKGTCSKCDEVSY------GEFEDYYEGLSIGVAGDED 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Unc-89NP_001097440.1 RhoGEF 90..260 CDD:238091
PH_unc89 275..388 CDD:270134
Atrophin-1 <493..690 CDD:331285
TonB_N 502..>596 CDD:318287
I-set 1017..1108 CDD:333254 24/110 (22%)
I-set 1123..1212 CDD:254352 21/101 (21%)
I-set <1236..1299 CDD:333254 7/28 (25%)
I-set 1313..1403 CDD:254352
Ig_3 1406..1487 CDD:316449
I-set 1499..1595 CDD:254352
I-set 1599..1690 CDD:333254
I-set 1694..1786 CDD:254352
I-set <1836..1903 CDD:333254
I-set 1922..2005 CDD:333254
I-set 2018..2108 CDD:333254
I-set 2113..2214 CDD:333254
I-set 2220..2302 CDD:254352
I-set 2318..2408 CDD:254352
I-set 2415..2506 CDD:254352
I-set 2519..2608 CDD:254352
I-set 2615..2696 CDD:254352
I-set 2717..2805 CDD:254352
FN3 2834..2925 CDD:238020
I-set <2996..3063 CDD:333254
I-set 3067..3157 CDD:333254
PK_Unc-89_rpt1 3182..3440 CDD:271011
I-set 3654..3744 CDD:333254
FN3 3748..3840 CDD:238020
STKc_Unc-89_rpt2 3893..4151 CDD:271014
Caps2XP_011241801.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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