DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obsc and Obscn

DIOPT Version :10

Sequence 1:NP_001097440.1 Gene:Obsc / 3346201 FlyBaseID:FBgn0053519 Length:4218 Species:Drosophila melanogaster
Sequence 2:XP_063126174.1 Gene:Obscn / 338458 RGDID:631335 Length:9299 Species:Rattus norvegicus


Alignment Length:5328 Identity:983/5328 - (18%)
Similarity:1625/5328 - (30%) Gaps:2089/5328 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   582 KEVPPSASHSKEVEALVATE-----IRESLTETRSTVVESGQSSE---------IREEIVVTE-- 630
            |.:||  ...:::.:..|||     :|..:.:..|:.||..:.||         :|::..|.|  
  Rat  4311 KALPP--RFIEDLRSQEATEGTMVTLRCQMNKAPSSTVEWRKGSESLRDGGRYSLRQDGAVCELQ 4373

  Fly   631 ------ESSLEGKQVVALEREPSPCSIPKIQVYRPVE-------CENPVVT------KHKPIELK 676
                  |.:.|...|...||..:..|: |....|.:|       .|..:||      |..|:|.:
  Rat  4374 IRGLTLEDAGEYSCVFGQERTSATLSV-KALPPRFIEDLGSQEAMEGTMVTLRCQMSKTAPVEWR 4437

  Fly   677 DIVGYSESLRDGDTAPAGGSPGRQQGYSANITDHASLTIWNNRLANIAGDRSGANQHLQQSGPPP 741
            .   .||:||||     |....||.|....:..|        |||            |:.:|   
  Rat  4438 K---GSETLRDG-----GRYSLRQDGALCELQIH--------RLA------------LEDAG--- 4471

  Fly   742 PPIPPNFTRMPGFFQPLPLIAYETTIEILIVKARPPSPPPPPPPTIKRVLVHTESLEQKTQNFFE 806
                 .::.:.|         .|.|...|.|||.||.              .||.|  |:|...|
  Rat  4472 -----EYSCVCG---------QEKTSATLSVKALPPR--------------FTEDL--KSQEATE 4506

  Fly   807 GIYDAASSDTSLRNAKQKIRSIK----STVLKSKDSTNYAQDTVQKAKARDFLHIFTPPVKKRPI 867
            |      :..:||....|:..::    |..|:.....:..||..                     
  Rat  4507 G------TMVTLRCQMSKVTPVEWRKGSETLRDGGRYSLRQDGA--------------------- 4544

  Fly   868 YEIVEEPVNIFELE--GDYT--------------ESIADDFREPSADFEARGQSVGGMDDYYSGY 916
              :.|..::...||  |:|:              :::...|.|   |..::..:.|.|.......
  Rat  4545 --VCELQIHRLALEDAGEYSCLCGQEKTSATLSVKALPPRFIE---DLRSQKATEGTMVTLRCQM 4604

  Fly   917 SRAST---RRYETKTRDYDR------GTSYDSTV------ERSQYGISSRRDRSS----VD---- 958
            |:.:.   |:.....||.||      |...:..:      :..:|.....::|:|    ||    
  Rat  4605 SKVAPVEWRKGSESLRDGDRYSLRQDGAMCELQICGLAVEDSGEYSCVCGQERTSATLTVDALPP 4669

  Fly   959 -------KVEARSSLLATGRTESRAASRAESRAESR-----ASYSVAESRAGIRSSSR--LQEDR 1009
                   |.||....:||.|.:...|:..|.|..|.     ..||:.:..|......|  ..||.
  Rat  4670 KFTEGLKKEEATEGNMATLRCQMSKAAPVEWRKGSETLRDGGRYSLRQDGAACELQIRGLALEDA 4734

  Fly  1010 P----LRSVDK-----------PVVVKMLKSVQVEPGETAHFEIQF-KDQPGLVTWLKDNKPLED 1058
            .    |...:|           |..::.|:|.:...|.......|. |..|  |.|.|.::.|.|
  Rat  4735 GEYSCLCGQEKTSATLSVKALPPRFIEDLRSQEATEGNMVTLRCQMSKVTP--VEWRKGSETLRD 4797

  Fly  1059 --RLADRITQTAAPMNSYRLDIKNCSETDAGTYT------------------------IRAQSAS 1097
              |.:.|.......:..:||.::     |||.|:                        :|:|.|:
  Rat  4798 GGRYSLRQDGAVCELQIHRLALE-----DAGEYSCLCGQEKTSATLSVKALPPRFTEDLRSQKAT 4857

  Fly  1098 ETTTVSAQLAVGQAP---------------------------------------------GHDET 1117
            |.|.|:.:..:.:|.                                             |.::|
  Rat  4858 EGTMVTLRCQMSKAAPVEWRKGSETLRDGGRYSLRQDGAVYELQIRGLALEDAGEYSCVCGQEKT 4922

  Fly  1118 KTNTE----PA-FLVSLKDAEMIENTLFRFMVKIIGDPKPRVKFYKDEKEILETNDRIQIIRDKD 1177
            .....    || |:..|:..|:.|::......::   .|.....::...|.|:...|..:.:|. 
  Rat  4923 SATLSVKALPARFIEDLRSQEVPESSTVTMRCEL---SKKAPVVWRKGSETLKNGARYSLRQDG- 4983

  Fly  1178 YLGFYELVIADVQKTDAGTYSCKATNKHGEANCEAIATTV----------EDKNPFGALSGQILP 1232
              ...||.|.|:...|||.|||....:...|....:|..|          .::....:|..::..
  Rat  4984 --AVCELEIRDLTVEDAGEYSCTCGKERTSATLSIMAPQVVFQKLLENLQAEEGSTASLRCELSV 5046

  Fly  1233 AGEKPVFQWKRNGEEFDP----EERFKVLFGEDEDSLALVFQHVKPEDAGIYTCVAQTSTGNISC 1293
            .....|  |.:.|.|...    |.|.:....|      |:.:.|:.||||.|:|    :.|:.:.
  Rat  5047 PNTAVV--WSKGGLELQADTCRETRQQGCVAE------LLLRDVRREDAGEYSC----TCGSQTT 5099

  Fly  1294 SAELSVQGAIQTLNREPEKPTLVIEHREANASIGGSAILELQCKGFPKPA-VQWKHDGEVIQVDD 1357
            ||.|.|..|          |...::..:|. .:.......|:|:...:.| |:|:...  :|:..
  Rat  5100 SATLMVTAA----------PVRFLQELQAQ-DVDEGTTARLRCELSREAASVEWRKGS--LQLFP 5151

  Fly  1358 RHKF-MYEDEESMSLVIKNVDTVDAGVYTIEAINELGQDESSINLVVKAP-PKIKK-ITDITCSA 1419
            ..|: |.::..:..|::..|:..|||.||.:|    |..:|...|.|:|| ||.|. :......|
  Rat  5152 CAKYQMVQEGTTAELLVHGVEQEDAGEYTCDA----GHMQSIARLSVRAPKPKFKTGLQSKEQEA 5212

  Fly  1420 GETIKM-----EIEVEGFPQPTVQVTNNGKDVTAESNVKISSSSIGKSLEKVV--VEVKEIKLSQ 1477
            |.|.::     |.| .|.|   ||....|.::...|..::...  |...|.::  :|.|:     
  Rat  5213 GGTARLCCQLSEAE-SGTP---VQWLKEGVELHVSSKYEMRCQ--GAMCELLIHKLEAKD----- 5266

  Fly  1478 AGNYSIKATNDLSQTSEYWSCTVKSKPVI----VKNFESEYIHG-------EKENVQMTVRIDAY 1531
                          |.|| :|.|..:..:    ||..|...:.|       ..|:|:.|.::...
  Rat  5267 --------------TGEY-ACVVGGQKTLASLRVKEPEVTIVQGLVDMEVQADEDVEFTCKVSQA 5316

  Fly  1532 PEAKLTWY--------HDETEIKITDSKYTVSSDGNAYTLKITGATRVDAGKYTVKATNEHGSAT 1588
            ....:.|:        ::.||:       .|..||..:.|::.|.|..|||..:...    ||.:
  Rat  5317 GATDVQWHLQGLPLQSNEVTEV-------AVLGDGCTHVLQLKGVTLDDAGTVSFHV----GSHS 5370

  Fly  1589 SSTQLLIKCAPEFTHKLKNITVAEGDSNVELVVGVDAY--------PRPHAKWYIDGIEID-EKR 1644
            ||.||::: .||       :||.|...:|:|..|.||:        ....|:|.:.|:.:. .:.
  Rat  5371 SSAQLIVR-VPE-------VTVLEPLKDVQLSEGQDAHFQCRLSRASGQEARWALGGVPLQCNEM 5427

  Fly  1645 NDFRHVEEGNDFKLIMNQVATNMQGNYTCKIMNDYGKLEDNCVVTVNCKPKVKRGLKNVEVQEGK 1709
            ||.. ||:|..:.|.:::|.....|..|.::.:...:.:........|   :.|||:||:|..|:
  Rat  5428 NDIT-VEQGTLYSLTLHKVTLEDAGTITLQVGSCSSEAQLKVTEAALC---LVRGLQNVDVFAGE 5488

  Fly  1710 --SFTLEVEVYSEPEAKIKWFKDGHEIYE--DARIKISRDTQRIENYYLTLNLARTEDAGTYEMK 1770
              :|:.||.....|||  :|:.||..:..  ::.:.:...|.    :.|||:.....|:||...:
  Rat  5489 VATFSCEVSRAGGPEA--RWWLDGTLLQNSPESAMTVREGTV----HSLTLSGLGVADSGTITFR 5547

  Fly  1771 ATNFIGETTSTCKVAVL--TSEALSLEQTVTKTLIATTEEPEEGAVPEIVHVDVFQQHSYESVPL 1833
            .    |...||.|:.|.  |.|.:|..|.:.         .|||...|::     .|:|      
  Rat  5548 T----GPLVSTAKLLVKDPTVEVVSAMQDLV---------VEEGGSAELL-----CQYS------ 5588

  Fly  1834 KYEVIATGIPKP-EAIWYHDGKPITPDKH-TAITVDGDHYKLEVQSLDLVDAGEY-------KVV 1889
                      :| :|:|..:.:.:..|.| ..|..|....:|.::.....|:|.|       :||
  Rat  5589 ----------RPVQAMWKMNEREVCADGHRVIIEQDWTVARLTLRPALPCDSGIYSCEAAGTRVV 5643

  Fly  1890 VQNKVGEKSHQGELSLSGIAEYRKPILTQGPGLKDIKVNKGDKV---CEPVVFTADPAPEIVL-- 1949
            ...:|..|:                  |...||:::...:|.:.   |:.      ..||:..  
  Rat  5644 ALLQVQAKN------------------TVVRGLENVDALEGGEALFECQL------SQPEVAAHT 5684

  Fly  1950 -LKDGQPVVETNNVKLKVDKKDAENGLVQYTCTLNILEAEIKDSGRYELKVKNKYGELVTS---- 2009
             |.|.:||..:.||::..    .||||.......|:   :.:||.|    |....|::|||    
  Rat  5685 WLLDDEPVHTSANVEVVY----FENGLRHLLLLKNL---KPQDSCR----VTFLAGDVVTSAFLT 5738

  Fly  2010 --GW-IDVLAKPEISGLNDTKCLPGDTICFEALV-QANPKPKVSWTRGNENLCNHENCEVIADVD 2070
              || ::||..|:     |.....|..:||..:: :|.|..:.:|.. |......::.:.|...|
  Rat  5739 VRGWRLEVLEPPQ-----DASVKAGTQVCFTCILSEALPVGEATWYI-NGAAIQPDDADWIVTAD 5797

  Fly  2071 ADKYRLVFQSVSPCEDGKYTITATNSEGRAAV------------------DFNLAV--------- 2108
            ...:.|...:..|...|:.|..|.::...|.:                  |.::.:         
  Rat  5798 GSHHALTLSNAQPQHAGEVTFAARDAVASARLSVLALPGPPEDAEVVGRSDHSVTLSWVAPVSDG 5862

  Fly  2109 ------------------------LVEKPTFIVQP-ESQSIHDYRPVSTKVLVHGVPLPTIEWFK 2148
                                    ||..|..:|.. .|...:.:|..:......|.|:...:..|
  Rat  5863 GGGLCGYRVEMKEASTGQWQLCHELVPGPECVVDGLVSGKTYRFRVAAVGPAGAGEPVHLPQMVK 5927

  Fly  2149 DDKPINYEAINKP-----------------------------------------------GKD-- 2164
            ..:|:..:....|                                               |:|  
  Rat  5928 IAEPMEPKPAPAPAPALAPTPAPIPTPAPAPAPAPTPAPTPTPAPAPAPAPAPATRRAVVGEDVC 5992

  Fly  2165 -KLYAKEDT-----KKGTDQI-------------ESVLDIKSFRENDVGAYTC----------VA 2200
             :|....|.     .|||::|             ..:|.||.||..|.|.|.|          .:
  Rat  5993 LELEVAADAGEVVWHKGTERIHPSGHFEVLSQGQRQMLVIKGFRTEDQGEYRCGPIQGLPSSGAS 6057

  Fly  2201 TNEIGVT-----KAPFKLAMLSLAPSFVKKLDNAL---DVLQGEPLVLECCVDG-SPLP----TV 2252
            |..:.||     :.|   |..||.|...::.|..|   .:.:...:..|..:|. |.||    .|
  Rat  6058 TFNVVVTSGSEDEVP---AQPSLPPEAAQEGDLHLLWEALARKRRMSREPTLDSISELPEEDSRV 6119

  Fly  2253 QWLK-DGDEVKPSESIKISTNPDGLVK---LEINSCQPND---SGAYKLI-------------IS 2297
            |.|: :.:|..|..|...|| .|.|.:   .:::....:|   :|...||             ::
  Rat  6120 QHLRQEAEEAAPDLSEGYST-ADELARTGEADLSHTSSDDESRAGTPSLITYLKKAGGPGISPLA 6183

  Fly  2298 NPHGEKVALCAVAVKPEEMQPKFLK---------------------------------------- 2322
            :.|..:|   |.:|||::.|.:.:.                                        
  Rat  6184 SKHEAQV---ATSVKPQKQQERVVPTCPLPGDLNAADLKDPSLDKAAVKIQAAFKGYKVRKEMKQ 6245

  Fly  2323 ---PITSQT-----VVVGEPLKLEAQVTGFPAPEVKWYKDGMLLRPSPEINFINSPNGQIGLIID 2379
               |:.|:|     ..||:.|:||..|:........|.|||:.|......:.....:|...|::.
  Rat  6246 QGGPVFSRTFGDTEAQVGDALRLECVVSTKADVRACWLKDGVELTDGRHYHIDQLKDGTCSLLVT 6310

  Fly  2380 AAQPLDAGVYKCLIANK-----------------------GGEI--------------------- 2400
            ...|.|:|.|.|.::.|                       |||:                     
  Rat  6311 GLGPTDSGRYTCQVSTKFGSVSHSACVMVSGTESEAESSSGGELDDAFRRAARRLHRLFRTKSPA 6375

  Fly  2401 ------------EG--------------------------------------------------- 2402
                        ||                                                   
  Rat  6376 ELSEEELFLSADEGPMEPEEPADWQTYREDENFVCIRFESLAEAHRAVTCFRDMFATMGIGVEIS 6440

  Fly  2403 ------------VSKV--EIVP------------KESKPVFVAELQDASSIEGFPVKMDIKVVGN 2441
                        :.||  .::|            .::.|||:.|||:....:|:|:..|..|.|.
  Rat  6441 LGEQGPRGVEMRIGKVAPTVIPAVPLAKTPGLQTSDAAPVFLTELQNQDVQDGYPMSFDCVVTGQ 6505

  Fly  2442 PKPKLQWFHNGHEIKPDASHIAIVENPDNSSSLIIEKTAPGDSGLYEVIAQNPEGSTASKAKLYV 2506
            |.|.::||.:|..::.| .|..|.|:......|||....|.|.|:|..:|:|..|.:::||:|.|
  Rat  6506 PVPSVRWFKDGKLLEED-DHYMINEDQQGGHQLIITAVVPADMGVYRCLAENSMGVSSTKAELRV 6569

  Fly  2507 ---------APKADETA----------------TE----EAPQFVSALRDVNADEGQELV-LSAP 2541
                     |..|.||:                ||    :.||.:..|:|:....|..|. ....
  Rat  6570 ELTSTDYDTAADATETSSYFSAQGYLSSREQEGTESDEGQLPQVLEELKDLQVAPGTRLAKFQLK 6634

  Fly  2542 FISNPMPEVIWSKDGVTLTPNERLLMTCDGKHI-GLTIKPAEAADSGNYTCLLANPLGEDSSACN 2605
            ....|.|::.|.|||..||.::.:.|| |.|.: .|.|......|||.|...::|.:|...|:..
  Rat  6635 VKGYPAPKLYWFKDGQPLTTSDHIRMT-DKKTLHTLEIVSITREDSGQYAAYISNAVGAAYSSAR 6698

  Fly  2606 ANVR-----------KVYK---PPVFTQKISDQQQVFGNNAKIPVTVSGVPYPDLEWYFQ--DKP 2654
            ..||           .|::   ||...:|.:.::...|::....|.|.|.|.|.:.|..:  :|.
  Rat  6699 LLVRGPSEPEEKPQPDVHERLVPPRILEKFTPKKVKRGSSITFSVKVEGHPAPSVHWLKEEAEKG 6763

  Fly  2655 I----PKSEKYSIKNDGDHHMLIVNNCEKGDQGVYKCIASNREGKDITQGRLDIVNEIKKHSRSE 2715
            :    |.:..|::.:....|.|::.:..:..||.|.|||:|..|:.:....|.|....|:..:..
  Rat  6764 VLWIGPDTPGYTMASSSKQHSLVLLDVGRQHQGTYTCIATNAAGQALCSASLHISGLAKEEEQER 6828

  Fly  2716 PPVFLKKIGDCDIYEGMVAKF---TACATGYPEPEVEWF------KNDQKLFPSDRF----LIDI 2767
                        :.|.:::.|   |:.|......|...|      :..:.|...:..    |.::
  Rat  6829 ------------VKEALISSFLQGTSQAVSAQMSESASFADLVGQRKGESLVAEEAHSHLSLSEV 6881

  Fly  2768 EPNGLLRLTIKNVTEYDVGRYS-CRIFNPYGD--------------------------------- 2798
            .....|:.....:||....:.| .::..|.||                                 
  Rat  6882 GTEEFLQKLTSQITEMVSAKISQAKLQVPGGDSDEESKTPSASPRHGRSRPSSSVQESSSESEDG 6946

  Fly  2799 -------DICHAELFYDSLDSQQKPL---EDQYTDF-------------KKYKKSGAPPPLSEGP 2840
                   ||......|..|.::|..:   |.||.:.             |..|.|    |..:|.
  Rat  6947 DSRGEIFDIYVVTADYLPLGAEQDAIILREGQYVEVLDSAHPLRWLVRTKPTKSS----PSRQGW 7007

  Fly  2841 IISRMTDRGLLLS--WNPSVPLTPRYPITYQIEMMDLPEGDWRTLRTGV---------------- 2887
            :.....|:.|.||  |.|:.  .|.:|      ...:.|.::||..:.|                
  Rat  7008 VSPAYLDKRLKLSPEWGPTE--APEFP------GEAVSEDEYRTRLSSVIQELLSSEQAFVGELQ 7064

  Fly  2888 ---------------------------------------------RSCA-------CDIRNLEPF 2900
                                                         :||.       |.|:|.|.|
  Rat  7065 FLESHHIKHLDRSPRVPAAVASQKTVIFRNVQDISHFHSSFLKELQSCGTDDDVAMCFIKNQEAF 7129

  Fly  2901 RDY-RF---RVRVENKFGVSDP-SPYTQTYRQKLV-------PDPPKTYTYLP------------ 2941
            ..| .|   ||:.|:.. ||.| ..:.:.|.::::       |.||....||.            
  Rat  7130 EKYLEFLVGRVQAESVV-VSTPVQEFYKKYAEEMLSAKDPTQPPPPPLQHYLEQPVERVQKYQAL 7193

  Fly  2942 --------------------------------------------PGT------------------ 2944
                                                        |||                  
  Rat  7194 LKELIRNKARNRQNCALLEQAYAVVSALPQRAENKLHVSLMENYPGTLEALGEPIRQGHFIVWEG 7258

  Fly  2945 -----------------------------DFRPETSPYF-------------------------- 2954
                                         |.|.:|..|.                          
  Rat  7259 APGARMPWKGHNRHVFLFRNHLVICKPRRDSRTDTFSYVFRNMMKLNSIDLNDQVEGDDRAFEVW 7323

  Fly  2955 ----------------------------------------PKDFD-------------------- 2959
                                                    |.:|:                    
  Rat  7324 HEREDSVRKYLLQARTVIIKNSWVKEICGIQQRLAQPVWRPPEFEEELADCTAELGETVKLACRV 7388

  Fly  2960 ----------------IERPPH-------DG---------------------------------- 2967
                            :|..||       ||                                  
  Rat  7389 TGTPKPIVSWYKDGKPVEVDPHHILIEDPDGSCTLILDNLTGIDSGQYMCFAASAAGNASTLGKI 7453

  Fly  2968 LAQAPQFLLREQDISYGVKDHNTELMWFVYGYPKPKMTYYFDDMLIESGGRFDQ-SYTRNGQATL 3031
            |.|.|...:.:...:..|:..:.::...|.|.|.|::.:|.|..|:..|.|:.. :..|:|...|
  Rat  7454 LVQVPPRFVNKVRATPFVEGEDAQITCTVEGAPYPQIRWYKDGALLTLGNRYRMVNEPRSGMLVL 7518

  Fly  3032 FINKMLDRDVGWYEAVATNEHGEAR---------------------------QRVRLEIAEHP-- 3067
            .|......|:|.||....|..|..|                           :...:|.:.||  
  Rat  7519 VIQAASKEDLGHYECELVNRLGSTRCGGELYMQSPALRAWDQHHREQLVAAVEDASMEDSAHPTQ 7583

  Fly  3068 ------------RFL--------------------------------------------KRP--- 3073
                        |.|                                            .||   
  Rat  7584 EGADQQAASVLWRLLGSEALSPSPGGFPNTRQSEPPTSEEAAPQIPGTTSGTPGKLPEASRPGTY 7648

  Fly  3074 -------------DETFIMARKNG----------------------------------------- 3084
                         .|..:..|..|                                         
  Rat  7649 KGLEQGMTTTSGSQERNVPIRVEGTAWPGGGTGQLLLDVHSQVIMETTQRTYVCQAPDTGVTRAP 7713

  Fly  3085 -----------------RIEAKLVGIPLPEVHWFKDWKPIVDSSRIKISSYDPDIYVLSIHDSII 3132
                             :.:|.:.|.|.|.|.|:||...:|:.:|:: .......|.|.:.|...
  Rat  7714 SMQVTIEDLQVQVGDMAQFDAVIEGNPPPTVTWYKDSNQLVNGTRLR-QQQGGTTYSLVLMDVTP 7777

  Fly  3133 KDGGLYSISARNIAGSISTSVTVHIEENEDQYIYKTYGRHPYVRSKQLRYQDK----YDIGDELG 3193
            .|.|:|:..|:|..|.:.....:.:           ||.......|| .|:.|    |::.:|:|
  Rat  7778 HDAGVYTCVAQNAGGQVLCKAELLV-----------YGGDKSDAEKQ-AYRRKLHSFYEVQEEIG 7830

  Fly  3194 RGTQGITYHAVERSSGDNYAAKIMYGRPELRPFMLNELEMMNTFNHKNLIRPYDAYDTDRSVTLI 3258
            ||..|.......:.:..:.|||.:..|.:.|.....|.:::.|.:|..:....|.::|.:::.||
  Rat  7831 RGVFGFVKRVQHKGNKMSCAAKFIPLRSKTRAQAYQERDILATLSHPLVTGLLDQFETQKTLILI 7895

  Fly  3259 MELAAGGELVRDNLLRRDYYTERDIAHYIRQTLWGLEHMHEMGVGHMGLTIKDLLISVVGGDIIK 3323
            :||.:..||: |.|.::...||.::..||:|.:.||.::|...:.|:.:...::|:.....:.||
  Rat  7896 LELCSSEELL-DRLFKKAVVTEAEVKVYIQQLVEGLHYLHSHDILHLDIKPPNILMVHPAREDIK 7959

  Fly  3324 VSDFGLSRKINRHNLSTLDYGMPEFVSPEVVNKEGVNFSHDMWTVGLITYVLLGGHNPFLGIDDR 3388
            :.|||.::||.........||.|||||||::.:..|:...|:|.:|:|:|:.|...:||.|..||
  Rat  7960 ICDFGFAQKITPSEPQYSKYGSPEFVSPEIIEQSPVSEGSDIWAMGVISYLSLTCSSPFAGESDR 8024

  Fly  3389 ETLTKIREGRWDFKDEIWTHISDDGRDFISRLLLYSPEERMDVKTALKHPWFFMLDRPVYDHDYQ 3453
            .||..:.|||..:...:..|:|:|.:|||...|..:|..|......|.||| |:...|..:..: 
  Rat  8025 ATLLNVLEGRVSWSSPMAAHLSEDAKDFIKATLQKTPRARPSASQCLAHPW-FLKSMPAEEAHF- 8087

  Fly  3454 IGTDRLRNYYDHFRDWYANASCKNYFRRRRLSGCFQHP--------------------------- 3491
            |.|.:|:......|...:..|.|:....|.:....|.|                           
  Rat  8088 INTKQLKFLLARSRWQRSLMSYKSILVMRSIPELLQGPPDSPSLGVARHLRGEASGSSSSSSSSD 8152

  Fly  3492 -------------------SKMVYPPGHVYTPENTPE-------------PLPE----------- 3513
                               |.:::|.|.:....:.||             |.|.           
  Rat  8153 NELAPFARAKSLPPSPVTHSPLLHPRGFLRPSASLPEETEASMSTADAAMPAPPQSAGPPASPGC 8217

  Fly  3514 -PR----------------------IRAKR----------------------------------- 3520
             ||                      :.|||                                   
  Rat  8218 VPRHSVISSLFYQQAGEGAERGSKALGAKRHPARRRHLLKGGYIARALPGLREPLMEFSVLEEEA 8282

  Fly  3521 --EEVVS---------------------------------------------KYLHP-------- 3530
              ||..|                                             :||.|        
  Rat  8283 ANEEQASLMTKTPSFETALRLPSSNVREVPGRSRSLDNPPGTASPSPEAYKEQYLSPPSSGLTHE 8347

  Fly  3531 ------DYELGLIQ------------------------------SESHYQYG---------PDTY 3550
                  .::.|.:|                              |..|.:.|         |.:.
  Rat  8348 TTAKGMGHKEGFLQESVPFSPTSGDLRPVKQEGSSQDSCRGKPASSCHSELGSGPQEGCGSPSSQ 8412

  Fly  3551 LL----------------------QLRDVNFPVR---------------LREYMKVAHRRSPSFA 3578
            |.                      |.:...||.:               |.|........||..|
  Rat  8413 LCGSLPPQSSKKELSKPCGPLFSEQPQAAPFPAQASPLLGSQKEPQDSYLPEKPCPVPSSSPGSA 8477

  Fly  3579 --------------LNDSVDWSLPVIRER-----RRFT--------------------------- 3597
                          ..|:.|::.|:.|.:     |:|:                           
  Rat  8478 SQVDASLDTEGLSEAGDTCDFTPPLQRPQEQATTRKFSLESRGGYAGVAGYGTFAFGGDAGGMLG 8542

  Fly  3598 ------------DIMDEEIDDERTRS-------------------------------RISMY--- 3616
                        ....||.|:..|.|                               ::|:.   
  Rat  8543 QGPLWARMAWAVSQSSEEQDEAATESPQPLDSSGPIAEASGVPLRTSPSLTPWEEVEQVSLVQIR 8607

  Fly  3617 -------AA-----------------NESYSIRRL----------------------RTELGPRL 3635
                   ||                 ::.|.|:.|                      .||.|..|
  Rat  8608 DLSGDAEAADTISLDISEVDPAYLNLSDLYDIKYLPFEFMIFRRVPKPVEQPESPGSETEEGQGL 8672

  Fly  3636 DEYTE--------------------------------ADAMIETQR------------------- 3649
            .|:.|                                .:|.:..:|                   
  Rat  8673 AEFLEEAVWPWPGELGLRAGLEITEEPQEPGDLEALLGEAAVGRKRKWSPSRGLFQFPGRCLSGE 8737

  Fly  3650 -------------------------------EGYP--------------------PFFREKPQTI 3663
                                           ||.|                    |.|..:....
  Rat  8738 EPVELGLRQRVKASMAHISRILKGKPEGPEKEGPPRKKAGLASFRLSGLKGRDQAPSFLRELSDE 8802

  Fly  3664 AITENQPSHIHCFAVGDPKPCVQWFKNDMVLTESKRIKISVDEDGRSILRFEPALHFDVGVYKVV 3728
            |:...|...:.|..:..|.....|.|:..:|..|..:.||.......:|........|:|.|...
  Rat  8803 AVVLGQSVTLACQVLAQPTAQATWSKDGALLESSGHLLISSTLKNFQLLTILVVTEEDLGTYTCC 8867

  Fly  3729 ARNKVGQTVARCRIVVATLPDAPDSPEISANSGTEILLRWKQPRDDGHSTVLCYSLQYKLSNCDA 3793
            ..|.:|..|....:..|..|.:...||:.......:||.||.....|..|   |.:|..:.. .:
  Rat  8868 VSNPLGTAVTTGVLRKAERPSSSPRPEVGELYTDAVLLVWKPVESYGPVT---YIVQCCIEG-GS 8928

  Fly  3794 WTTVADNIDHEFYLLHDLQPNTNYQFRLASKNRIGWSEMGIPVSASTVGGDAPKIHITKAMKHLQ 3858
            |||:|.:|....||...|.....|.||.|..::.|......|.....:||.          .|| 
  Rat  8929 WTTLASDISDCCYLTGKLPRGGMYTFRTACVSKAGMGPYSSPSEQVLLGGP----------NHL- 8982

  Fly  3859 QLTENGHQVVPEEERVHTDYHCEREPPNWVTDSSVSDKYSFISEIARGEFSTIVKGIQKSTDTVV 3923
                     ..|||       ..|..|..:..|:.:  ::|.::|.||.||.:.:..:|::...:
  Rat  8983 ---------ASEEE-------SSRGRPAQLLPSTKT--FAFQTQIRRGRFSVVRQCREKASGRAL 9029

  Fly  3924 VAKILEVTDENEDNVVAEFDNFKTLRHERIPALFSAYKPLNVPIAIFVMEKLQGADVLTYFSSRH 3988
            .|||:....|::..|:.|::..|.|.|..:..|.:||  |:....:.::|...|.::|...:.|.
  Rat  9030 AAKIVPYQPEDKTTVLREYEALKRLHHPHLAQLHAAY--LSPRHLVLILELCSGPELLPSLAERD 9092

  Fly  3989 EYSEQMVATVVTQLLDALQYLHWRGYCHLNIQPDNVVMASVRSIQVKLVDFGSAKKVNKLGMKVT 4053
            .|||..|...:.|:|.|.||||.:...||:::.:|:::.....:  |::|.|:|:.:::  .||.
  Rat  9093 SYSESDVKDYLWQMLSATQYLHAQHILHLDLRSENMMVTEYNLL--KVIDLGNAQSLSQ--EKVP 9153

  Fly  4054 PCGS----LDFQPPEMINDEPIFPQSDIWSLGALTYLLLSGCSPFRGADEYETKQNISFVRYRFE 4114
            |..:    |:...||::..:...||:|||::|...:::|||..|.......:.::.:.....:..
  Rat  9154 PPENFKDYLETMAPELLEGQGAVPQTDIWAIGVTAFIMLSGEYPVSSEGTRDLQKGLRKGLIQLS 9218

  Fly  4115 NLFKEVTPEATRFIMLLFKRHPTKRPYTEDCLEHRWLMSSDYMVRKRERAIFLGSRLKTFCDE 4177
            ..:..::..|..|:.......|..||....||:..||........:.....|..:||:.|..|
  Rat  9219 RCYAGLSGGAVAFLQSSLCARPWGRPCASTCLQCGWLTEEGPTGSRPTPVTFPTARLRAFVRE 9281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ObscNP_001097440.1 RhoGEF 90..260 CDD:238091
PH_unc89 275..388 CDD:270134
Not5 <477..>652 CDD:444384 21/91 (23%)
Ig 1017..1108 CDD:472250 26/117 (22%)
Ig strand B 1034..1038 CDD:409353 0/3 (0%)
Ig strand C 1046..1050 CDD:409353 1/3 (33%)
Ig strand E 1074..1078 CDD:409353 2/3 (67%)
Ig strand F 1088..1093 CDD:409353 1/28 (4%)
Ig strand G 1101..1104 CDD:409353 1/2 (50%)
I-set 1123..1212 CDD:400151 22/89 (25%)
Ig strand B 1140..1144 CDD:409353 0/3 (0%)
Ig strand C 1153..1157 CDD:409353 0/3 (0%)
Ig strand E 1182..1186 CDD:409353 2/3 (67%)
Ig strand F 1196..1201 CDD:409353 3/4 (75%)
Ig strand G 1209..1212 CDD:409353 0/2 (0%)
Ig <1236..1299 CDD:472250 19/66 (29%)
Ig strand C 1238..1242 CDD:409353 1/3 (33%)
Ig strand E 1259..1269 CDD:409353 2/9 (22%)
Ig strand F 1279..1284 CDD:409353 2/4 (50%)
Ig strand G 1292..1295 CDD:409353 0/2 (0%)
I-set 1313..1403 CDD:400151 21/91 (23%)
Ig strand B 1330..1334 CDD:409353 0/3 (0%)
Ig strand C 1343..1347 CDD:409353 2/4 (50%)
Ig strand E 1369..1373 CDD:409353 1/3 (33%)
Ig strand F 1383..1388 CDD:409353 2/4 (50%)
Ig strand G 1396..1399 CDD:409353 1/2 (50%)
Ig_3 1406..1487 CDD:464046 19/89 (21%)
I-set 1499..1595 CDD:400151 26/114 (23%)
Ig strand B 1522..1526 CDD:409353 1/3 (33%)
Ig strand C 1535..1539 CDD:409353 0/3 (0%)
Ig strand E 1561..1565 CDD:409353 1/3 (33%)
Ig strand F 1575..1580 CDD:409353 0/4 (0%)
Ig strand G 1588..1591 CDD:409353 1/2 (50%)
Ig 1599..1690 CDD:472250 22/99 (22%)
Ig strand B 1617..1621 CDD:409353 2/3 (67%)
Ig strand C 1630..1634 CDD:409353 1/3 (33%)
Ig strand E 1656..1660 CDD:409353 1/3 (33%)
Ig strand F 1670..1675 CDD:409353 1/4 (25%)
Ig strand G 1683..1686 CDD:409353 0/2 (0%)
I-set 1694..1786 CDD:400151 27/95 (28%)
Ig strand B 1711..1715 CDD:409353 1/3 (33%)
Ig strand C 1724..1728 CDD:409353 0/3 (0%)
Ig strand E 1752..1756 CDD:409353 1/3 (33%)
Ig strand F 1766..1771 CDD:409353 1/4 (25%)
Ig strand G 1779..1782 CDD:409353 1/2 (50%)
Ig <1836..1903 CDD:472250 15/75 (20%)
Ig strand C 1846..1850 CDD:409353 1/3 (33%)
Ig strand E 1871..1875 CDD:409353 1/3 (33%)
Ig strand F 1885..1890 CDD:409353 2/11 (18%)
Ig 1922..2005 CDD:472250 20/88 (23%)
Ig strand B 1933..1937 CDD:409353 1/6 (17%)
Ig strand C 1946..1950 CDD:409353 1/6 (17%)
Ig strand E 1971..1984 CDD:409353 4/12 (33%)
Ig strand F 1994..1999 CDD:409353 1/4 (25%)
Ig 2018..2108 CDD:472250 18/108 (17%)
Ig strand B 2034..2038 CDD:409353 2/3 (67%)
Ig strand C 2047..2051 CDD:409353 0/3 (0%)
Ig strand E 2074..2078 CDD:409353 1/3 (33%)
Ig strand F 2088..2093 CDD:409353 1/4 (25%)
Ig strand G 2101..2104 CDD:409353 0/20 (0%)
Ig 2113..2214 CDD:472250 30/184 (16%)
Ig strand B 2130..2134 CDD:409353 0/3 (0%)
Ig strand C 2143..2147 CDD:409353 0/3 (0%)
Ig strand E 2176..2185 CDD:409353 3/21 (14%)
Ig strand F 2195..2200 CDD:409353 2/14 (14%)
I-set 2220..2302 CDD:400151 23/109 (21%)
Ig strand B 2238..2242 CDD:409353 0/3 (0%)
Ig strand C 2251..2255 CDD:409353 2/3 (67%)
Ig strand E 2277..2281 CDD:409353 0/6 (0%)
Ig strand F 2291..2296 CDD:409353 2/17 (12%)
Ig strand G 2304..2307 CDD:409353 1/2 (50%)
I-set 2318..2408 CDD:400151 29/258 (11%)
Ig strand B 2335..2339 CDD:409353 2/3 (67%)
Ig strand C 2348..2352 CDD:409353 0/3 (0%)
Ig strand E 2374..2378 CDD:409353 1/3 (33%)
Ig strand F 2388..2393 CDD:409353 2/4 (50%)
Ig 2415..2506 CDD:472250 33/90 (37%)
Ig strand B 2432..2436 CDD:409353 0/3 (0%)
Ig strand C 2445..2449 CDD:409353 0/3 (0%)
Ig strand E 2472..2476 CDD:409353 1/3 (33%)
Ig strand F 2486..2491 CDD:409353 1/4 (25%)
Ig strand G 2499..2502 CDD:409353 0/2 (0%)
I-set 2519..2608 CDD:400151 27/90 (30%)
Ig strand B 2536..2540 CDD:409353 1/4 (25%)
Ig strand C 2549..2553 CDD:409353 0/3 (0%)
Ig strand E 2574..2578 CDD:409353 1/4 (25%)
Ig strand F 2588..2593 CDD:409353 1/4 (25%)
I-set 2615..2696 CDD:400151 22/86 (26%)
Ig strand B 2632..2636 CDD:409353 0/3 (0%)
Ig strand C 2645..2649 CDD:409353 0/3 (0%)
Ig strand E 2670..2674 CDD:409353 2/3 (67%)
Ig strand F 2684..2689 CDD:409353 2/4 (50%)
Ig strand G 2697..2700 CDD:409353 0/2 (0%)
I-set 2717..2805 CDD:400151 17/141 (12%)
Ig strand B 2734..2738 CDD:409353 1/6 (17%)
Ig strand C 2747..2751 CDD:409353 1/3 (33%)
Ig strand E 2773..2777 CDD:409353 1/3 (33%)
Ig strand F 2787..2792 CDD:409353 1/5 (20%)
Ig strand G 2800..2803 CDD:409353 1/2 (50%)
FN3 2834..2925 CDD:238020 29/165 (18%)
Ig <2996..3063 CDD:472250 20/94 (21%)
Ig strand C 3003..3007 CDD:409353 0/3 (0%)
Ig strand E 3029..3033 CDD:409353 1/3 (33%)
Ig strand F 3043..3048 CDD:409353 2/4 (50%)
Ig strand G 3056..3059 CDD:409353 1/29 (3%)
Ig 3067..3157 CDD:472250 27/221 (12%)
Ig strand B 3085..3088 CDD:409353 0/2 (0%)
Ig strand C 3097..3101 CDD:409353 1/3 (33%)
Ig strand E 3123..3127 CDD:409353 2/3 (67%)
Ig strand F 3137..3142 CDD:409353 1/4 (25%)
Ig strand G 3150..3153 CDD:409353 0/2 (0%)
PK_Unc-89_rpt1 3182..3440 CDD:271011 81/261 (31%)
Ig 3654..3744 CDD:472250 19/89 (21%)
Ig strand B 3671..3675 CDD:409353 0/3 (0%)
Ig strand C 3684..3688 CDD:409353 0/3 (0%)
Ig strand E 3710..3714 CDD:409353 1/3 (33%)
Ig strand F 3724..3729 CDD:409353 1/4 (25%)
Ig strand G 3737..3740 CDD:409353 1/2 (50%)
FN3 3748..3840 CDD:238020 25/91 (27%)
STKc_Unc-89_rpt2 3893..4151 CDD:271014 65/261 (25%)
ObscnXP_063126174.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.