DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Unc-89 and Vwa7

DIOPT Version :9

Sequence 1:NP_001097440.1 Gene:Unc-89 / 3346201 FlyBaseID:FBgn0053519 Length:4218 Species:Drosophila melanogaster
Sequence 2:XP_038954602.1 Gene:Vwa7 / 309611 RGDID:1303137 Length:920 Species:Rattus norvegicus


Alignment Length:716 Identity:130/716 - (18%)
Similarity:220/716 - (30%) Gaps:255/716 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   783 PPPTIKRVLVHTESLEQKTQNFFEGIYDAASSDTSLRNAKQKIRSIKSTVLKSKDSTNYAQDTVQ 847
            ||..:.::|:      ..|..||..|:...::..|:.:                      ||..:
  Rat    13 PPVLLLQLLL------PPTSAFFPNIWSLLAAPGSITH----------------------QDLTE 49

  Fly   848 KAKARDFLHIF--TPPVKKRPIYEIVEEPVNIFELEGDYTESIADDFREPSADFEARGQSVGGMD 910
            :|.....|.:|  .||..:..::           || ||                 ||:::.. |
  Rat    50 EAALNVTLELFLEQPPPGRPHLH-----------LE-DY-----------------RGRTLLA-D 84

  Fly   911 DYYSGY--SRASTRRYETKTRDYDRGTSYDSTVERSQYGISSRRDRSSVDKVEARSSLLATGRTE 973
            |.::.|  |..|:||:.....:..|..:....:..|         :|:.| :...:..|..|||.
  Rat    85 DIFAAYFGSGFSSRRFRAALGEVSRANAAQDFLPAS---------KSNPD-LHFDAERLVQGRTR 139

  Fly   974 SRAASRAESRAESRASYSVAESRAGIRSSSRLQEDRPLRSVDKPVVVKMLKSVQ--------VEP 1030
            ...|.|....|.....|::|..|.|                      ..|.::|        ||.
  Rat   140 LEGALRETLVAARALEYTLARQRLG----------------------AALHALQDFYSHSNWVEL 182

  Fly  1031 GETAHFEIQFKDQPGLVTW----LKDNKPLEDRLADRITQTAAPMNSYRLDI------------- 1078
            ||.       :..|.|: |    |.....:.|.........:.|.|...|.:             
  Rat   183 GER-------QPHPHLL-WPRRELWSLAQVGDPTCSDCEGLSCPGNMMNLTMLTSGYFGTNPPKP 239

  Fly  1079 -KNCSETDAGTYTIRAQSASETTTVSAQLAVGQAPGHDETKTNTEPAFLVSLKDAEMIENTLFRF 1142
             ..||.  .|.:.   ||:|            |.|.....|.:|.|:|                 
  Rat   240 PGKCSH--GGRFD---QSSS------------QPPRGGINKDSTSPSF----------------- 270

  Fly  1143 MVKIIGDPKPRVKFYKDEKEILETNDRIQIIRDK-DYLGFYELVIADVQKTDAGTYSCKATNKHG 1206
                  .|..|:.....|..:|.:.:.:.::|.: ...||..|:  |:....:.::....|...|
  Rat   271 ------SPHHRLHLQAAEVALLASIEALSLLRSRLGTRGFSRLL--DITPASSLSFVLDTTGSMG 327

  Fly  1207 E----ANCEAIATTVEDK--NPFGALSGQILP---AGEKPVFQWKRNGEEFDPEE------RFKV 1256
            |    |..:| ...||.:  :|...:|..::|   .|..|||...      ||:.      ....
  Rat   328 EEINAAKIQA-RRIVEQRQGSPMEPVSYILVPFHDPGFGPVFTTS------DPDSFWQKLTEIHA 385

  Fly  1257 LFGEDE-----DSLALVFQHVKP-EDAGIYTCVAQTSTGNISCSAELSVQGAIQTLNREPE-KPT 1314
            |.|.||     .:|.|...|..| .|..::|..:         ..:..:...:::|.||.. :.|
  Rat   386 LGGGDEPEMCLSALELALLHTPPLSDIFVFTDAS---------PKDAFLTNRVESLTRERRCRVT 441

  Fly  1315 LVIEHREANASIGGSAILELQCKGFPKPAVQWKHDGEVIQVDDRHKFMYEDEESMSLVIKNVDTV 1379
            .::....:.|...|........:..|..|:.....||||...|:|             |::|..|
  Rat   442 FLVTEDPSRAQGRGRREALSPSRFEPYEAIALASGGEVIFTKDQH-------------IRDVAAV 493

  Fly  1380 DAGVYTIEAINELGQDESSINLVVKAPPKIKKITDITCSAGE-------------TIKMEIEVEG 1431
                        :|:..:.:..:...||        ..:.||             |::|..::.|
  Rat   494 ------------VGESMAGLVTLPLEPP--------IFTPGEPCVFAVDSLLSKVTVRMHGDISG 538

  Fly  1432 F 1432
            |
  Rat   539 F 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Unc-89NP_001097440.1 RhoGEF 90..260 CDD:238091
PH_unc89 275..388 CDD:270134
Atrophin-1 <493..690 CDD:331285
TonB_N 502..>596 CDD:318287
I-set 1017..1108 CDD:333254 20/116 (17%)
I-set 1123..1212 CDD:254352 15/93 (16%)
I-set <1236..1299 CDD:333254 15/74 (20%)
I-set 1313..1403 CDD:254352 15/89 (17%)
Ig_3 1406..1487 CDD:316449 8/40 (20%)
I-set 1499..1595 CDD:254352
I-set 1599..1690 CDD:333254
I-set 1694..1786 CDD:254352
I-set <1836..1903 CDD:333254
I-set 1922..2005 CDD:333254
I-set 2018..2108 CDD:333254
I-set 2113..2214 CDD:333254
I-set 2220..2302 CDD:254352
I-set 2318..2408 CDD:254352
I-set 2415..2506 CDD:254352
I-set 2519..2608 CDD:254352
I-set 2615..2696 CDD:254352
I-set 2717..2805 CDD:254352
FN3 2834..2925 CDD:238020
I-set <2996..3063 CDD:333254
I-set 3067..3157 CDD:333254
PK_Unc-89_rpt1 3182..3440 CDD:271011
I-set 3654..3744 CDD:333254
FN3 3748..3840 CDD:238020
STKc_Unc-89_rpt2 3893..4151 CDD:271014
Vwa7XP_038954602.1 Het-C <163..>190 CDD:399889 7/55 (13%)
vWFA 316..>422 CDD:412136 26/121 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4475
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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