DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vmat and LOC733714

DIOPT Version :10

Sequence 1:NP_001014525.1 Gene:Vmat / 3346192 FlyBaseID:FBgn0260964 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_001037956.1 Gene:LOC733714 / 733714 XenbaseID:XB-GENE-29099047 Length:425 Species:Xenopus tropicalis


Alignment Length:457 Identity:197/457 - (43%)
Similarity:274/457 - (59%) Gaps:56/457 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 RGSNRLVLVIVAIALLLDNMLLTTVVPIIPEFLYDIRHPDAPLDSFPRTPLTSNVPPPPTPCPCN 199
            |.|..|:|.:||:|:::|.:|.|.|.||.|..|||..:.:.      .|.:..|          |
 Frog     9 RDSRWLILFVVAVAMVMDYILFTIVAPIAPALLYDTEYGNR------NTTVLLN----------N 57

  Fly   200 KDGSEAAPLEISTISPEE---NETYYRELEERHNELVGETVEVGLLFASKAFVQLLVNPIVGPLT 261
            ..||..  ...|.|:..|   |:|...|.::..||   |.|.||||.|.||.:|||.|||||.:.
 Frog    58 SSGSSL--YRDSIINNTESAGNQTQCYEEKDYLNE---ENVLVGLLLAIKALLQLLTNPIVGKII 117

  Fly   262 HRIGYSIPMFAGFVIMFLSTIIFAFGRSYLVLFVARALQGIGSSCSSVSGMGMLADRFTDDKERG 326
            :|.||..|:|.|.:||||||::|||..||..|.|||.|||||||.::|..:||||..|.||.|||
 Frog   118 NRTGYDAPLFCGTIIMFLSTLMFAFADSYAFLCVARGLQGIGSSFTAVPALGMLAHVFPDDAERG 182

  Fly   327 NAMGIALGGLALGVLIGPPFGGVMYEFVGKSAPFLILAALALGDGLLQLFMLQPS-IQKAETEPP 390
            .||||||.|:|:|||.|||||..||||||||||||.:|||||.||:|||.:|:|: ....:....
 Frog   183 KAMGIALSGVAIGVLAGPPFGSAMYEFVGKSAPFLAIAALALLDGVLQLCILRPTRFSTVDVPAT 247

  Fly   391 SLKSLISDPYILIAAGAITFANMGIAMLEPSLPLWMVDNMGATRWEQGVAFLPASISYLIGTNLF 455
            ..|:|:.|||||:||..:...|:...|||.:||:.|::.|.|.|::.|:.|||..::|.|..|:|
 Frog   248 PYKNLLMDPYILVAAVGLCICNLTFGMLETTLPIRMMETMCAPRYQLGLCFLPCIVAYFICLNVF 312

  Fly   456 GPLGHKIGRWFAACLGLIIIGGCLIFIPMATSITHLIIPNAGLGFAIGMVDSSMMPELGYLVDIR 520
            ..|..|||                               :|.||...||:::|:||.:.:|||:|
 Frog   313 AELAQKIG-------------------------------SAALGIGFGMMETSVMPLMAHLVDLR 346

  Fly   521 HSAVYGSVYALGDVAFCVGFAVGPALSGSLVKSIGFEWMLFGIAILCFMYAPLLTLLKNPPTSDE 585
            |::.||.:||:.|:|.|:|:|:||:..|::.|::||:|::..:.|:..::|||..||:|||..:|
 Frog   347 HTSNYGGIYAISDIALCIGYALGPSCGGAIAKAVGFKWLMIILGIINLVFAPLFILLRNPPGKEE 411

  Fly   586 KK 587
            .|
 Frog   412 TK 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VmatNP_001014525.1 MFS_SLC18A1_2_VAT1_2 141..578 CDD:340942 188/440 (43%)
LOC733714NP_001037956.1 MFS_SLC18A1_2_VAT1_2 15..404 CDD:340942 188/440 (43%)

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