| Sequence 1: | NP_001014529.1 | Gene: | U3-55K / 3346176 | FlyBaseID: | FBgn0053505 | Length: | 484 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_004695.1 | Gene: | RRP9 / 9136 | HGNCID: | 16829 | Length: | 475 | Species: | Homo sapiens |
| Alignment Length: | 471 | Identity: | 198/471 - (42%) |
|---|---|---|---|
| Similarity: | 291/471 - (61%) | Gaps: | 35/471 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 13 GTKKRKNPAATTKGKPLKKGGKPGKSTPAAGGPVPKKQRRPKEEDEEIASDDEEYNSDLGGDDNT 77
Fly 78 LAFSSDEGEEETPQDKRLRLAKQYLSEIEKQEAERAEDRELAQ-SVEQRLQTEYLDSVGKLRRNI 141
Fly 142 AGSLKACESSRILKHKLHHTPICALALSPDGKFLYTGAKSQFLLKWCTETGKVLEKSDVLSHREE 206
Fly 207 PETGKK--RRSHVISICLSSDMKYLALAEGGPHIQIWCPQTMKHIKTLKGHRDSVAGLVFRKGTH 269
Fly 270 DLYSAAKDRSVKIWSLDEMAYVESLFGHQTAVTSIDALSRERAITAGGSDCSLRIWKITEESQLI 334
Fly 335 YNGHKDSIECVKYINDEHFVSGGMDGAIGLWSALKKKPICTTQLAHGV-GENGVAN--WITAIAV 396
Fly 397 VVNTDLVATGSCDGCVRLWQTNPNARKMNLIQSISIAGFINGLAFNADGSKLFVATGQEHRLGRW 461
Fly 462 WRLKEAKNQVVVLDVK 477 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| U3-55K | NP_001014529.1 | Upf2 | 55..>125 | CDD:281974 | 24/70 (34%) |
| WD40 | <150..484 | CDD:225201 | 155/333 (47%) | ||
| WD40 | 156..416 | CDD:295369 | 124/264 (47%) | ||
| WD40 repeat | 163..203 | CDD:293791 | 12/39 (31%) | ||
| WD40 repeat | 218..254 | CDD:293791 | 13/35 (37%) | ||
| WD40 repeat | 259..295 | CDD:293791 | 21/35 (60%) | ||
| WD40 repeat | 302..336 | CDD:293791 | 20/33 (61%) | ||
| WD40 repeat | 342..379 | CDD:293791 | 16/36 (44%) | ||
| WD40 repeat | 391..431 | CDD:293791 | 19/39 (49%) | ||
| WD40 repeat | 436..461 | CDD:293791 | 13/24 (54%) | ||
| RRP9 | NP_004695.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..75 | 19/76 (25%) | |
| Nuclear localization signal. /evidence=ECO:0000255 | 8..40 | 6/16 (38%) | |||
| WD40 | <136..403 | CDD:225201 | 125/269 (46%) | ||
| WD40 | 139..439 | CDD:238121 | 138/302 (46%) | ||
| WD 1 | 144..183 | 12/41 (29%) | |||
| WD40 repeat | 149..197 | CDD:293791 | 14/50 (28%) | ||
| WD 2 | 197..236 | 15/38 (39%) | |||
| WD40 repeat | 203..239 | CDD:293791 | 13/35 (37%) | ||
| WD 3 | 239..278 | 24/38 (63%) | |||
| WD40 repeat | 244..280 | CDD:293791 | 21/35 (60%) | ||
| WD 4 | 281..320 | 25/38 (66%) | |||
| WD40 repeat | 287..320 | CDD:293791 | 20/32 (63%) | ||
| WD 5 | 322..360 | 19/37 (51%) | |||
| WD40 repeat | 327..363 | CDD:293791 | 16/35 (46%) | ||
| WD 6 | 374..413 | 19/38 (50%) | |||
| WD40 repeat | 379..421 | CDD:293791 | 20/41 (49%) | ||
| WD 7 | 419..460 | 23/40 (58%) | |||
| WD40 repeat | 424..449 | CDD:293791 | 13/24 (54%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C165147866 | |
| Domainoid | 1 | 1.000 | 61 | 1.000 | Domainoid score | I10560 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0299 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H3452 | |
| Inparanoid | 1 | 1.050 | 369 | 1.000 | Inparanoid score | I2148 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG54739 | |
| OrthoDB | 1 | 1.010 | - | - | D453052at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004346 | |
| OrthoInspector | 1 | 1.000 | - | - | oto89287 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102033 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR19865 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1935 |
| SonicParanoid | 1 | 1.000 | - | - | X3065 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 16 | 15.800 | |||||