| Sequence 1: | NP_001014529.1 | Gene: | U3-55K / 3346176 | FlyBaseID: | FBgn0053505 | Length: | 484 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_015463.1 | Gene: | RRP9 / 856255 | SGDID: | S000006341 | Length: | 573 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 565 | Identity: | 144/565 - (25%) |
|---|---|---|---|
| Similarity: | 244/565 - (43%) | Gaps: | 140/565 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 48 KKQRRPKEE--------DEEIA--SDDEEYNSDLGGDDNTLAFSSDEGEEETPQDKRLRLAKQYL 102
Fly 103 SEIEKQEA-------ERAEDRELAQSVEQRLQTEYLD-SVGKLRRN-IAGSLK---ACESSRILK 155
Fly 156 H----------KLHHTPI------CALALSP----------------DGK-FLYTGAKSQFLLKW 187
Fly 188 -CTETGKVLEKSDV---------LSHREEPETGKKRRSHVISICLSSDMKYLALAEGGPHIQIWC 242
Fly 243 PQTMKHIKTL--KGHRDSVAGLVFRKGTHDLYSAAKDRSVKIWSLDEMAYVESLFGHQTAVTSID 305
Fly 306 ALSRERAITAGGSDCSLRIWKITEESQLIYNGHKD------------------------------ 340
Fly 341 ------SIECVKYINDEHFVSGGMDGAIGLWSALKKKPICTTQLAHGV----GENGVAN------ 389
Fly 390 --------------WITAIAVVVNTDLVATGSCDGCVRLWQTNPNARKMNLIQSISIA-GFINGL 439
Fly 440 AFNADGS------KLFVATGQEHRLGRW-WRLKEAKNQV--VVLD 475 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| U3-55K | NP_001014529.1 | Upf2 | 55..>125 | CDD:281974 | 29/86 (34%) |
| WD40 | <150..484 | CDD:225201 | 101/441 (23%) | ||
| WD40 | 156..416 | CDD:295369 | 81/364 (22%) | ||
| WD40 repeat | 163..203 | CDD:293791 | 12/72 (17%) | ||
| WD40 repeat | 218..254 | CDD:293791 | 6/37 (16%) | ||
| WD40 repeat | 259..295 | CDD:293791 | 10/35 (29%) | ||
| WD40 repeat | 302..336 | CDD:293791 | 13/33 (39%) | ||
| WD40 repeat | 342..379 | CDD:293791 | 17/36 (47%) | ||
| WD40 repeat | 391..431 | CDD:293791 | 9/39 (23%) | ||
| WD40 repeat | 436..461 | CDD:293791 | 6/30 (20%) | ||
| RRP9 | NP_015463.1 | WD40 | 233..500 | CDD:421866 | 64/266 (24%) |
| WD40 repeat | 239..278 | CDD:293791 | 6/38 (16%) | ||
| WD40 repeat | 284..320 | CDD:293791 | 10/35 (29%) | ||
| WD40 repeat | 325..360 | CDD:293791 | 14/34 (41%) | ||
| WD40 repeat | 406..437 | CDD:293791 | 15/30 (50%) | ||
| WD40 repeat | 475..515 | CDD:293791 | 9/39 (23%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C157344038 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0299 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H3452 | |
| Inparanoid | 1 | 1.050 | 151 | 1.000 | Inparanoid score | I1118 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1798 |
| OMA | 1 | 1.010 | - | - | QHG54739 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004346 | |
| OrthoInspector | 1 | 1.000 | - | - | oto99327 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102033 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR19865 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1935 |
| SonicParanoid | 1 | 1.000 | - | - | X3065 | |
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.740 | |||||