Sequence 1: | NP_001014529.1 | Gene: | U3-55K / 3346176 | FlyBaseID: | FBgn0053505 | Length: | 484 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102248.1 | Gene: | Rrp9 / 363134 | RGDID: | 1307881 | Length: | 478 | Species: | Rattus norvegicus |
Alignment Length: | 483 | Identity: | 202/483 - (41%) |
---|---|---|---|
Similarity: | 294/483 - (60%) | Gaps: | 48/483 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 PGA---KGTKKRKNPAATTKGKPLKKGGKPGKSTPAAGGPVPKKQRRPKEEDEEIASDDEEYNSD 70
Fly 71 LGGDDNTLAFSSDEGE-----EETPQDKRLRLAKQYLSEIEKQEAERAEDRELAQ-SVEQRLQTE 129
Fly 130 YLDSVGKLRRNIAGSLKACESSRILKHKLHHTPICALALSPDGKFLYTGAKSQFLLKWCTETGKV 194
Fly 195 LEKSDVLSHREEPETGKK--RRSHVISICLSSDMKYLALAEGGPHIQIWCPQTMKHIKTLKGHRD 257
Fly 258 SVAGLVFRKGTHDLYSAAKDRSVKIWSLDEMAYVESLFGHQTAVTSIDALSRERAITAGGSDCSL 322
Fly 323 RIWKITEESQLIYNGHKDSIECVKYINDEHFVSGGMDGAIGLWSALKKKPICTTQLAHGV-GENG 386
Fly 387 VAN--WITAIAVVVNTDLVATGSCDGCVRLWQTNPNARKMNLIQSISIAGFINGLAFNADGSKLF 449
Fly 450 VATGQEHRLGRWWRLKEAKNQVVVLDVK 477 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
U3-55K | NP_001014529.1 | Upf2 | 55..>125 | CDD:281974 | 29/75 (39%) |
WD40 | <150..484 | CDD:225201 | 152/333 (46%) | ||
WD40 | 156..416 | CDD:295369 | 123/264 (47%) | ||
WD40 repeat | 163..203 | CDD:293791 | 13/39 (33%) | ||
WD40 repeat | 218..254 | CDD:293791 | 13/35 (37%) | ||
WD40 repeat | 259..295 | CDD:293791 | 21/35 (60%) | ||
WD40 repeat | 302..336 | CDD:293791 | 20/33 (61%) | ||
WD40 repeat | 342..379 | CDD:293791 | 16/36 (44%) | ||
WD40 repeat | 391..431 | CDD:293791 | 18/39 (46%) | ||
WD40 repeat | 436..461 | CDD:293791 | 13/24 (54%) | ||
Rrp9 | NP_001102248.1 | WD40 | 142..442 | CDD:238121 | 136/302 (45%) |
WD40 repeat | 152..200 | CDD:293791 | 14/50 (28%) | ||
WD40 repeat | 206..242 | CDD:293791 | 13/35 (37%) | ||
WD40 repeat | 247..283 | CDD:293791 | 21/35 (60%) | ||
WD40 repeat | 290..323 | CDD:293791 | 20/32 (63%) | ||
WD40 repeat | 330..366 | CDD:293791 | 16/35 (46%) | ||
WD40 repeat | 382..424 | CDD:293791 | 19/41 (46%) | ||
WD40 repeat | 427..452 | CDD:293791 | 13/24 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166341724 | |
Domainoid | 1 | 1.000 | 58 | 1.000 | Domainoid score | I10547 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0299 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3452 | |
Inparanoid | 1 | 1.050 | 361 | 1.000 | Inparanoid score | I2129 |
OMA | 1 | 1.010 | - | - | QHG54739 | |
OrthoDB | 1 | 1.010 | - | - | D453052at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004346 | |
OrthoInspector | 1 | 1.000 | - | - | oto96410 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102033 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19865 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3065 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |