Sequence 1: | NP_001014529.1 | Gene: | U3-55K / 3346176 | FlyBaseID: | FBgn0053505 | Length: | 484 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002935676.2 | Gene: | rrp9 / 100497378 | XenbaseID: | XB-GENE-966597 | Length: | 493 | Species: | Xenopus tropicalis |
Alignment Length: | 513 | Identity: | 196/513 - (38%) |
---|---|---|---|
Similarity: | 296/513 - (57%) | Gaps: | 66/513 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 SSFFLKPGAKGTKKRKNPAATTKGKPLKKGGKPGKSTPAAGGPVPKKQRRPKEEDEEIASDDEEY 67
Fly 68 NSDLGGDDNTLAFS-----SDEGE--EETPQDKRLRLAKQYLSEIEKQEAERAEDRELAQ-SVEQ 124
Fly 125 RLQTEYLDSVGKLRRNIAGSLKACESSRILKHKLHHTPICALALSPDGKFLYTGAKSQFLLKWCT 189
Fly 190 ETGKVLEKSDVLSHREEPE-TGKKRRSHVISICLSSDMKYLALAEGGPHIQIWCPQTMKHIKTLK 253
Fly 254 GHRDSVAGLVFRKGTHDLYSAAKDRSVKIWSLDEMAYVESLFGHQTAVTSIDALSRERAITAGGS 318
Fly 319 DCSLRIWKITEESQLIYNGHKD--------------------------SIECVKYINDEHFVSGG 357
Fly 358 MDGAIGLWSALKKKPICTTQLAHGV-GENGVAN--WITAIAVVVNTDLVATGSCDGCVRLWQTNP 419
Fly 420 NARKMNLIQSISIAGFINGLAFNADGSKLFVATGQEHRLGRWWRLKEAKNQVVVLDVK 477 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
U3-55K | NP_001014529.1 | Upf2 | 55..>125 | CDD:281974 | 28/77 (36%) |
WD40 | <150..484 | CDD:225201 | 148/358 (41%) | ||
WD40 | 156..416 | CDD:295369 | 120/289 (42%) | ||
WD40 repeat | 163..203 | CDD:293791 | 13/39 (33%) | ||
WD40 repeat | 218..254 | CDD:293791 | 13/35 (37%) | ||
WD40 repeat | 259..295 | CDD:293791 | 21/35 (60%) | ||
WD40 repeat | 302..336 | CDD:293791 | 20/33 (61%) | ||
WD40 repeat | 342..379 | CDD:293791 | 17/36 (47%) | ||
WD40 repeat | 391..431 | CDD:293791 | 13/39 (33%) | ||
WD40 repeat | 436..461 | CDD:293791 | 12/24 (50%) | ||
rrp9 | XP_002935676.2 | WD40 | 133..460 | CDD:238121 | 131/328 (40%) |
WD40 repeat | 144..192 | CDD:293791 | 16/49 (33%) | ||
WD40 repeat | 198..234 | CDD:293791 | 13/35 (37%) | ||
WD40 repeat | 239..275 | CDD:293791 | 21/35 (60%) | ||
WD40 repeat | 282..316 | CDD:293791 | 20/33 (61%) | ||
WD40 repeat | 323..383 | CDD:293791 | 18/59 (31%) | ||
WD40 repeat | 400..440 | CDD:293791 | 13/39 (33%) | ||
WD40 repeat | 445..470 | CDD:293791 | 12/24 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 61 | 1.000 | Domainoid score | I10370 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3452 | |
Inparanoid | 1 | 1.050 | 343 | 1.000 | Inparanoid score | I2286 |
OMA | 1 | 1.010 | - | - | QHG54739 | |
OrthoDB | 1 | 1.010 | - | - | D453052at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004346 | |
OrthoInspector | 1 | 1.000 | - | - | oto103123 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19865 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X3065 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.080 |