DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btsz and Syt6

DIOPT Version :9

Sequence 1:NP_001247109.1 Gene:btsz / 3346167 FlyBaseID:FBgn0266756 Length:3734 Species:Drosophila melanogaster
Sequence 2:XP_038958947.1 Gene:Syt6 / 60565 RGDID:62012 Length:535 Species:Rattus norvegicus


Alignment Length:461 Identity:121/461 - (26%)
Similarity:188/461 - (40%) Gaps:112/461 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  3281 ASSGSTGKKL----GAGF-----QFLYSKRDARKRLNMSAEEAKVAAEELSR---SPVIGQRQAD 3333
            :|.|:...||    ..||     :..::..|....:.||.:|..:...:|.|   .|....|...
  Rat   116 SSRGNMADKLKDPSALGFLEAAVKISHTSPDIPAEVQMSVKEHIMRHTKLQRQTTEPASSTRHTS 180

  Fly  3334 GSGS-PIQSRASS-----ETWPTQSDE--DIDRLVAMHQNRSSLSSLGVRSESMASVYSGAGEGR 3390
            .... |.|...||     |..|..:::  .|.|:......:.|:.....:||:..|.        
  Rat   181 FKRHLPRQMHVSSVDYGNELPPAAAEQPTSIGRIKPELYKQKSVDGDEAKSEAAKSC-------- 237

  Fly  3391 YGTVVVKGQVEFAMQYNYKLSALEVHVVRCKDLAAVDAKRNRSDPYVKVYLLPDKSKAGKRKTKV 3455
                   |::.|:::|:|:...|.|.:::..||.|.|. ...||||||:|||||:.  .|.:|:|
  Rat   238 -------GKINFSLRYDYESETLIVRILKAFDLPAKDF-CGSSDPYVKIYLLPDRK--CKLQTRV 292

  Fly  3456 KKHTLNPIFDETMRFHTPISSLESRTLWLTVWHSDMFGRNDFLGEVSVNLQGRLFD-----NPQS 3515
            .:.||||.|||...|..|...|..|.|.|:|:..|.|.|:|.:|||.::   .||:     ...|
  Rat   293 HRKTLNPTFDENFHFPVPYEELADRKLHLSVFDFDRFSRHDMIGEVILD---NLFEASDLSRETS 354

  Fly  3516 QWYLLQ-ERSEPFDEVATYRGDIVVGLKYIPPENIKSSFFSRGSSITGSSSNLRKFGGSIKSVAS 3579
            .|..:| ..||..|     .|:|:..|.|:|                                  
  Rat   355 IWKDIQYATSESVD-----LGEIMFSLCYLP---------------------------------- 380

  Fly  3580 KSERTSKGGQLHVLVKEAKHLSPIKANGTCDAFCKSYLLPDRTRSSKQKTPVVKRTLHPSWNYTF 3644
                  ..|:|.:.|.:.::|..:...|..|.:.|..||.|..|..|:||.:.|.||:|.:|...
  Rat   381 ------TAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLLCDGRRLKKKKTTIKKNTLNPVYNEAI 439

  Fly  3645 VYEDVSLEELSERALELTVWDHDRLASNEFVGGIRFSL---GTGRSYGRQVEWMDATGKELSLWQ 3706
            :: |:..|.:.:.:|.::|.|:||:..||.:|..|..:   |.||.:                |.
  Rat   440 IF-DIPPENMDQVSLLISVMDYDRVGHNEIIGVCRVGISAEGLGRDH----------------WN 487

  Fly  3707 NMLDRP 3712
            .||..|
  Rat   488 EMLAYP 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btszNP_001247109.1 FYVE_Slp3_4_5 26..73 CDD:277286
SOBP <300..476 CDD:291927
C2A_SLP 3398..3520 CDD:176056 49/126 (39%)
C2B_SLP_1-2-3-4 3534..3723 CDD:175987 42/182 (23%)
Syt6XP_038958947.1 C2A_Synaptotagmin-1-5-6-9-10 237..361 CDD:176031 49/144 (34%)
C2B_Synaptotagmin-3-5-6-9-10 370..503 CDD:176048 42/181 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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