DRSC/TRiP Functional Genomics Resources

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Protein Alignment btsz and Syt1

DIOPT Version :9

Sequence 1:NP_001247109.1 Gene:btsz / 3346167 FlyBaseID:FBgn0266756 Length:3734 Species:Drosophila melanogaster
Sequence 2:NP_001028852.2 Gene:Syt1 / 25716 RGDID:3803 Length:421 Species:Rattus norvegicus


Alignment Length:315 Identity:92/315 - (29%)
Similarity:153/315 - (48%) Gaps:60/315 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  3398 GQVEFAMQYNYKLSALEVHVVRCKDLAAVDAKRNRSDPYVKVYLLPDKSKAGKRKTKVKKHTLNP 3462
            |::::::.|:::.:.|.|.:::..:|.|:| ....|||||||:|||||.|  |.:|||.:.||||
  Rat   143 GKLQYSLDYDFQNNQLLVGIIQAAELPALD-MGGTSDPYVKVFLLPDKKK--KFETKVHRKTLNP 204

  Fly  3463 IFDETMRFHTPISSLESRTLWLTVWHSDMFGRNDFLGEVSVNLQGRLFDNPQSQWYLLQERSEPF 3527
            :|:|...|..|.|.|..:||.:.|:..|.|.::|.:||..|.:....|.:...:|..||...:..
  Rat   205 VFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEE 269

  Fly  3528 DEVATYRGDIVVGLKYIPPENIKSSFFSRGSSITGSSSNLRKFGGSIKSVASKSERTSKGGQLHV 3592
            .|..   |||...|:|:|                                        ..|:|.|
  Rat   270 QEKL---GDICFSLRYVP----------------------------------------TAGKLTV 291

  Fly  3593 LVKEAKHLSPIKANGTCDAFCKSYLLPDRTRSSKQKTPVVKRTLHPSWNYTFVYEDVSLEELSER 3657
            ::.|||:|..:...|..|.:.|.:|:.:..|..|:||.:.|.||:|.:|.:|.:| |..|::.:.
  Rat   292 VILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFE-VPFEQIQKV 355

  Fly  3658 ALELTVWDHDRLASNEFVGGIRFSLGTGRSYGRQVEWMDATGKELSLWQNMLDRP 3712
            .:.:||.|:|::..|:.:|.:...             .::||.||..|.:||..|
  Rat   356 QVVVTVLDYDKIGKNDAIGKVFVG-------------YNSTGAELRHWSDMLANP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btszNP_001247109.1 FYVE_Slp3_4_5 26..73 CDD:277286
SOBP <300..476 CDD:291927
C2A_SLP 3398..3520 CDD:176056 45/121 (37%)
C2B_SLP_1-2-3-4 3534..3723 CDD:175987 44/179 (25%)
Syt1NP_001028852.2 Syt1_N 5..112 CDD:409248
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..141
Phospholipid binding. /evidence=ECO:0000305 135..381 84/297 (28%)
C2A_Synaptotagmin-1-5-6-9-10 142..264 CDD:176031 46/123 (37%)
C2B_Synaptotagmin-1 273..408 CDD:176047 44/182 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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