DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btsz and snt-2

DIOPT Version :9

Sequence 1:NP_001247109.1 Gene:btsz / 3346167 FlyBaseID:FBgn0266756 Length:3734 Species:Drosophila melanogaster
Sequence 2:NP_497261.2 Gene:snt-2 / 185680 WormBaseID:WBGene00004922 Length:369 Species:Caenorhabditis elegans


Alignment Length:395 Identity:103/395 - (26%)
Similarity:179/395 - (45%) Gaps:94/395 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  3334 GSGS-PIQSRASSETWPTQSD--EDIDRLVAMHQNRSSLSSLGVRSESMASVYSGAGEGRYGTVV 3395
            |:|: ||.|.......||.||  |.:      :.....|||            |||...:|    
 Worm    42 GNGAVPILSSKPITVQPTNSDYYEPV------NNGTLPLSS------------SGALIKQY---- 84

  Fly  3396 VKGQVEFAMQYNYKLSALEVHVVRCKDLAAVDAKRNRSDPYVKVYLLPDKSKAGKRKTKVKKHTL 3460
              |.:.|.::|:::.|.|.|.:|...||.|:| :...||||||||:||::.:  |.:|::.::||
 Worm    85 --GNIHFRVEYDFEQSKLSVTIVSASDLPAMD-RNGMSDPYVKVYVLPERKQ--KFETRIIRNTL 144

  Fly  3461 NPIFDETMRFHTPISSLESRTLWLTVWHSDMFGRNDFLGEVSVNLQGRLF------DNPQSQWYL 3519
            ||.::||.:|..|.:.|.|:||.|.|:..|...::|.:|::||.|:...|      :.|      
 Worm   145 NPTYNETFQFSIPFNELHSKTLMLVVYDYDRLSKDDKMGQLSVPLESIDFGITTDIERP------ 203

  Fly  3520 LQERSEPFDEVATYRGDIVVGLKYIPPENIKSSFFSRGSSITGSSSNLRKFGGSIKSVASKSERT 3584
             .::.|..||.....|||....:|.|..                                     
 Worm   204 -LQKPEKDDEKECRLGDICFSTRYRPAT------------------------------------- 230

  Fly  3585 SKGGQLHVLVKEAKHLSPIKANGTCDAFCKSYLLPDRTRSSKQKTPVVKRTLHPSWNYTFVYEDV 3649
               |.:.:.:.||::|..:...|:.|.:.|.||...|...||:||....:||:|.:|.:|.:: :
 Worm   231 ---GTVTLTIMEARNLKKMDVGGSSDPYVKIYLHHGRKLLSKKKTSRKYKTLNPYYNESFQFK-I 291

  Fly  3650 SLEELSERALELTVWDHDRLASNEFVGGIRFSLGTGR------SYGRQVEW--MDATGKELSLWQ 3706
            ....:.:..|.::|||:|:::.|:|:|.:  :||:..      ::....:|  |..:.:.:..|.
 Worm   292 EPHMIEKVHLIVSVWDYDKMSKNDFIGEV--TLGSKHLNLPQITHACSEQWAEMMTSRRPVVQWH 354

  Fly  3707 NMLDR 3711
            .:.:|
 Worm   355 TLQER 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btszNP_001247109.1 FYVE_Slp3_4_5 26..73 CDD:277286
SOBP <300..476 CDD:291927
C2A_SLP 3398..3520 CDD:176056 45/127 (35%)
C2B_SLP_1-2-3-4 3534..3723 CDD:175987 38/186 (20%)
snt-2NP_497261.2 C2 85..206 CDD:301316 45/130 (35%)
C2B_Synaptotagmin-1 217..357 CDD:176047 37/182 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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