DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btsz and snt-4

DIOPT Version :9

Sequence 1:NP_001247109.1 Gene:btsz / 3346167 FlyBaseID:FBgn0266756 Length:3734 Species:Drosophila melanogaster
Sequence 2:NP_491853.2 Gene:snt-4 / 172346 WormBaseID:WBGene00004924 Length:381 Species:Caenorhabditis elegans


Alignment Length:450 Identity:102/450 - (22%)
Similarity:189/450 - (42%) Gaps:106/450 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  3277 VGVGASSGSTGKKLGAGFQFLYSKRDARKRLNMSAEEAKVAAEE---------LSRSPVIGQRQA 3332
            :|||   |:.|.........|.:.|..|:..::.....:|.|..         |.:||       
 Worm    19 LGVG---GAVGLAALVAVAALLAVRKRRQYPSLLLPPRQVIAVRGGFPKGPGGLKQSP------- 73

  Fly  3333 DGSGSPIQSRASSETWPTQSDEDIDRLVAMHQNRS-SLSSLGVRSESMASVYSGAGEGRYGTVVV 3396
                ||:||..|:::.|:    .:..|..:.::|: .||...:.||                   
 Worm    74 ----SPLQSPLSNDSTPS----PVVPLQNLLEDRTRKLSPSELPSE------------------- 111

  Fly  3397 KGQVEFAMQYNYKLSALEVHVVRCKDLAAVDAKRNRS---DPYVKVYLLPDKSKAGKRKTKVKKH 3458
            :|.:.|.:.|:.....|.|.::.|::|..:...|:..   |||||:.|||::..  :.||::.:.
 Worm   112 RGNISFTLSYDSHTLTLLVSIINCRNLCEMVVSRDGQCLLDPYVKLQLLPEREH--RVKTRIVRS 174

  Fly  3459 TLNPIFDETMRFH-TPISSLESRTLWLTVWHSDMFGRNDFLGEVSVNL---QGRLFDNPQSQWYL 3519
            |.:|:::|....: .....:...||...|...|.:.|:..:||....|   :.::.:..:.:..|
 Worm   175 TTSPVYEEQFAMYGVTHEQVNFATLHFQVVAFDRYSRDTVVGECVYRLADAELQVHNEMRVELPL 239

  Fly  3520 LQERSEPFDEVATYRGDIVVGLKYIPPENIKSSFFSRGSSITGSSSNLRKFGGSIKSVASKSERT 3584
            |...:   |.||. ||::::.|.|      :::|                               
 Worm   240 LPRAT---DTVAA-RGELLLSLTY------QAAF------------------------------- 263

  Fly  3585 SKGGQLHVLVKEAKHLSPIKANGTCDAFCKSYLLPDR-TRSSKQKTPVVKRTLHPSWNYTFVYED 3648
               ..|.|:|.:|:.|......||.|.|.|.||..:. .|..|::|.|.:.||:|.:|.:||:| 
 Worm   264 ---NNLTVVVLKARGLGGRNDAGTADPFVKLYLRKESGERIVKKRTHVRRSTLNPVYNESFVFE- 324

  Fly  3649 VSLEELSERALELTVWDHDRLASNEFVGGIRFSLGTGRSYGRQVEWMDATGKELSLWQNM 3708
            :..:.|....::|.|.:|||:..|:.:|  |..|....|:  .||.::..|::::.|.::
 Worm   325 LPDDRLEHSVIDLQVINHDRVNRNDVIG--RALLNMEDSH--VVEVLENPGRQVAQWHHL 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btszNP_001247109.1 FYVE_Slp3_4_5 26..73 CDD:277286
SOBP <300..476 CDD:291927
C2A_SLP 3398..3520 CDD:176056 29/128 (23%)
C2B_SLP_1-2-3-4 3534..3723 CDD:175987 43/175 (25%)
snt-4NP_491853.2 C2A_Synaptotagmin-4-11 111..241 CDD:176034 31/150 (21%)
C2 250..381 CDD:301316 43/175 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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